RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
BRF1-203ENST00000379937 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
BRF1-203ENST00000379937 TNKSO95271 1327 aa18.09■□□□□ 0.49
BRF1-203ENST00000379937 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
BRF1-203ENST00000379937 RTN1Q16799 776 aa18.09■□□□□ 0.49
BRF1-203ENST00000379937 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
BRF1-203ENST00000379937 FBXO18Q8NFZ0 1043 aa18.09■□□□□ 0.49
BRF1-203ENST00000379937 PPARAQ07869 468 aa18.08■□□□□ 0.49
BRF1-203ENST00000379937 AKNAD1Q5T1N1 836 aa18.08■□□□□ 0.49
BRF1-203ENST00000379937 CPLX3Q8WVH0 158 aa18.08■□□□□ 0.49
BRF1-203ENST00000379937 KIF3AQ9Y496 699 aa18.08■□□□□ 0.49
BRF1-203ENST00000379937 PATL2C9JE40 543 aaKnown RBP18.08■□□□□ 0.48
BRF1-203ENST00000379937 ADAMTS3O15072 1205 aa18.08■□□□□ 0.48
BRF1-203ENST00000379937 HMGN5P82970 282 aaKnown RBP18.08■□□□□ 0.48
BRF1-203ENST00000379937 MECOMQ03112 1051 aa18.08■□□□□ 0.48
BRF1-203ENST00000379937 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
BRF1-203ENST00000379937 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.48
BRF1-203ENST00000379937 ATP1A3P13637 1013 aa18.08■□□□□ 0.48
BRF1-203ENST00000379937 SSRP1Q08945 709 aaKnown RBP18.08■□□□□ 0.48
BRF1-203ENST00000379937 TTF1Q15361 905 aaPredicted RBP18.08■□□□□ 0.48
BRF1-203ENST00000379937 VSIG10Q8N0Z9 540 aa18.08■□□□□ 0.48
BRF1-203ENST00000379937 UQCRFS1P1P0C7P4 283 aa18.07■□□□□ 0.48
BRF1-203ENST00000379937 HIBADHP31937 336 aaKnown RBP18.07■□□□□ 0.48
BRF1-203ENST00000379937 CCDC144BQ3MJ40 725 aa18.07■□□□□ 0.48
BRF1-203ENST00000379937 FAM200AQ8TCP9 573 aa18.07■□□□□ 0.48
BRF1-203ENST00000379937 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
BRF1-203ENST00000379937 TRPM3Q9HCF6 1732 aaPredicted RBP18.07■□□□□ 0.48
BRF1-203ENST00000379937 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 HSPA1LP34931 641 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 RBM5P52756 815 aaKnown RBP eCLIP18.06■□□□□ 0.48
BRF1-203ENST00000379937 TRIM28Q13263 835 aaKnown RBP18.06■□□□□ 0.48
BRF1-203ENST00000379937 IFIT1BQ5T764 474 aaKnown RBP18.06■□□□□ 0.48
BRF1-203ENST00000379937 TPTE2Q6XPS3 522 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 MKNK2Q9HBH9 465 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 GNL3LQ9NVN8 582 aaKnown RBP18.06■□□□□ 0.48
BRF1-203ENST00000379937 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 TCP10Q12799 353 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 TRAPPC3LQ5T215 181 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 KCNB2Q92953 911 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 BCL2L12Q9HB09 334 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 UFL1O94874 794 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 SEPT12Q8IYM1 358 aa18.06■□□□□ 0.48
BRF1-203ENST00000379937 ZNF202O95125 648 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 EARS2Q5JPH6 523 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 MRPS27Q92552 414 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 DHX58Q96C10 678 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 LY9Q9HBG7 655 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 GPR108Q9NPR9 543 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 MROH5Q6ZUA9 1318 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 WNT7AO00755 349 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 SH2B2O14492 632 aaPredicted RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 PFKFB1P16118 471 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 CLSTN2Q9H4D0 955 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 SLC3A2P08195 630 aaKnown RBP18.05■□□□□ 0.48
BRF1-203ENST00000379937 NOLC1Q14978 699 aaKnown RBP eCLIP18.05■□□□□ 0.48
BRF1-203ENST00000379937 ANO1Q5XXA6 986 aa18.05■□□□□ 0.48
BRF1-203ENST00000379937 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
BRF1-203ENST00000379937 MCM7P33993 719 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 ZNF384Q8TF68 577 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 TAF1P21675 1872 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 IGSF3O75054 1194 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 KIF23Q02241 960 aaPredicted RBP18.04■□□□□ 0.48
BRF1-203ENST00000379937 TRIM22Q8IYM9 498 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 ZNF654Q8IZM8 581 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 BLZF1Q9H2G9 400 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 MROH7-TTC4A0A0A0MT08 1334 aa18.04■□□□□ 0.48
BRF1-203ENST00000379937 SYKP43405 635 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 IGDCC4Q8TDY8 1250 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 IFNKQ9P0W0 207 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 CEP350Q5VT06 3117 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 SAFBQ15424 915 aaKnown RBP eCLIP18.03■□□□□ 0.48
BRF1-203ENST00000379937 TMC6Q7Z403 805 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 SMARCC2Q8TAQ2 1214 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 TCRBV5S4A2TA0A5A2 114 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 HSP90AA2PQ14568 343 aaPredicted RBP18.03■□□□□ 0.48
BRF1-203ENST00000379937 LINC00301Q8NCQ3 95 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 CNNM3Q8NE01 707 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 EPSTI1Q96J88 318 aa18.03■□□□□ 0.48
BRF1-203ENST00000379937 ZSCAN16Q9H4T2 348 aaPredicted RBP18.03■□□□□ 0.48
BRF1-203ENST00000379937 VWA3AA6NCI4 1184 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 MPHOSPH10O00566 681 aaKnown RBP18.02■□□□□ 0.48
BRF1-203ENST00000379937 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.48
BRF1-203ENST00000379937 ZNF274Q96GC6 653 aaPredicted RBP18.02■□□□□ 0.48
BRF1-203ENST00000379937 PCDHAC2Q9Y5I4 1007 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 JCADQ9P266 1359 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 USP27XA6NNY8 438 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms