RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SKAP1Q86WV1 359 aa22.58■■□□□ 1.21
SSU72-203ENST00000378725 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.21
SSU72-203ENST00000378725 ARMT1Q9H993 441 aa22.58■■□□□ 1.21
SSU72-203ENST00000378725 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
SSU72-203ENST00000378725 TLL2Q9Y6L7 1015 aa22.58■■□□□ 1.21
SSU72-203ENST00000378725 SSC5DA1L4H1 1573 aa22.58■■□□□ 1.2
SSU72-203ENST00000378725 FLT1P17948 1338 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
SSU72-203ENST00000378725 MAP3K11Q16584 847 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 SAPCD2Q86UD0 394 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 HOOK2Q96ED9 719 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 STRBPQ96SI9 672 aaKnown RBP22.57■■□□□ 1.2
SSU72-203ENST00000378725 ATRNL1Q5VV63 1379 aa22.57■■□□□ 1.2
SSU72-203ENST00000378725 TRPM7Q96QT4 1865 aa22.56■■□□□ 1.2
SSU72-203ENST00000378725 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
SSU72-203ENST00000378725 SDSP20132 328 aa22.56■■□□□ 1.2
SSU72-203ENST00000378725 USP5P45974 858 aa22.56■■□□□ 1.2
SSU72-203ENST00000378725 MAPKAPK5Q8IW41 473 aa22.56■■□□□ 1.2
SSU72-203ENST00000378725 M0R2C6 588 aa22.55■■□□□ 1.2
SSU72-203ENST00000378725 PPP1R12BO60237 982 aaPredicted RBP22.55■■□□□ 1.2
SSU72-203ENST00000378725 USP2O75604 605 aaPredicted RBP22.55■■□□□ 1.2
SSU72-203ENST00000378725 MAP3K10Q02779 954 aa22.55■■□□□ 1.2
SSU72-203ENST00000378725 ARMC9Q7Z3E5 817 aa22.55■■□□□ 1.2
SSU72-203ENST00000378725 SEC62Q99442 399 aaKnown RBP22.55■■□□□ 1.2
SSU72-203ENST00000378725 DHX36Q9H2U1 1008 aaKnown RBP22.55■■□□□ 1.2
SSU72-203ENST00000378725 HELLSQ9NRZ9 838 aa22.55■■□□□ 1.2
SSU72-203ENST00000378725 HTRA3P83110 453 aa22.54■■□□□ 1.2
SSU72-203ENST00000378725 MOB2Q70IA6 237 aa22.54■■□□□ 1.2
SSU72-203ENST00000378725 ZSCAN29Q8IWY8 852 aaPredicted RBP22.54■■□□□ 1.2
SSU72-203ENST00000378725 HHIPL1Q96JK4 782 aa22.54■■□□□ 1.2
SSU72-203ENST00000378725 ATP8A2Q9NTI2 1148 aa22.54■■□□□ 1.2
SSU72-203ENST00000378725 ABT1Q9ULW3 272 aaKnown RBP22.54■■□□□ 1.2
SSU72-203ENST00000378725 MYH7P12883 1935 aa22.54■■□□□ 1.2
SSU72-203ENST00000378725 RASSF10A6NK89 507 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 GPAA1O43292 621 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 PRKAB2O43741 272 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 LDLRAD1Q5T700 205 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 DCAF15Q66K64 600 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 SDR42E1Q8WUS8 393 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 CSRNP1Q96S65 589 aa22.53■■□□□ 1.2
SSU72-203ENST00000378725 DCP1AQ9NPI6 582 aaPredicted RBP22.53■■□□□ 1.2
SSU72-203ENST00000378725 ANGEL1Q9UNK9 670 aaKnown RBP22.53■■□□□ 1.2
SSU72-203ENST00000378725 UNCXA6NJT0 531 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 UBE2Q2LH0YL09 131 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 HIP1O00291 1037 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 TBC1D12O60347 775 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 PRKG1Q13976 671 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 TTLL12Q14166 644 aaPredicted RBP22.52■■□□□ 1.2
SSU72-203ENST00000378725 FAM227BQ96M60 508 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 PI4KBQ9UBF8 816 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 PALD1Q9ULE6 856 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 FZD1Q9UP38 647 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 SLC4A4Q9Y6R1 1079 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 PAPPA2Q9BXP8 1791 aa22.52■■□□□ 1.2
SSU72-203ENST00000378725 GNAT2P19087 354 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 IREB2P48200 963 aaKnown RBP22.51■■□□□ 1.19
SSU72-203ENST00000378725 HUNKP57058 714 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 NMIQ13287 307 aaPredicted RBP22.51■■□□□ 1.19
SSU72-203ENST00000378725 DEFB115Q30KQ5 88 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 MCMDC2Q4G0Z9 681 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 MIGA2Q7L4E1 593 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 METTL16Q86W50 562 aaKnown RBP22.51■■□□□ 1.19
SSU72-203ENST00000378725 KLRG1Q96E93 195 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 ZNF112Q9UJU3 913 aa22.51■■□□□ 1.19
SSU72-203ENST00000378725 A0A0D9SFI3 127 aa22.5■■□□□ 1.19
SSU72-203ENST00000378725 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
SSU72-203ENST00000378725 BMP2KLQ5H9B9 411 aa22.5■■□□□ 1.19
SSU72-203ENST00000378725 GIMAP6Q6P9H5 292 aa22.5■■□□□ 1.19
SSU72-203ENST00000378725 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
SSU72-203ENST00000378725 ZNF341Q9BYN7 854 aa22.5■■□□□ 1.19
SSU72-203ENST00000378725 SAP30BPQ9UHR5 308 aaKnown RBP22.5■■□□□ 1.19
SSU72-203ENST00000378725 PATL2C9JE40 543 aaKnown RBP22.49■■□□□ 1.19
SSU72-203ENST00000378725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.49■■□□□ 1.19
SSU72-203ENST00000378725 FOCADQ5VW36 1801 aa22.49■■□□□ 1.19
SSU72-203ENST00000378725 CDK5RAP2Q96SN8 1893 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 RGMBQ6NW40 437 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 CCDC129Q6ZRS4 1044 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 TTC6Q86TZ1 520 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 DNAJC5GQ8N7S2 189 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 DIAPH3Q9NSV4 1193 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
SSU72-203ENST00000378725 HERC5Q9UII4 1024 aaKnown RBP22.48■■□□□ 1.19
SSU72-203ENST00000378725 PHF20L1A8MW92 1017 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 HLA-DOAP06340 250 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 SLURP2P0DP57 97 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 CHMLP26374 656 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.47■■□□□ 1.19
SSU72-203ENST00000378725 ANKRD13AQ8IZ07 590 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 EHD4Q9H223 541 aa22.47■■□□□ 1.19
SSU72-203ENST00000378725 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
SSU72-203ENST00000378725 PLCD1P51178 756 aa22.46■■□□□ 1.19
SSU72-203ENST00000378725 CWC27Q6UX04 472 aaKnown RBP22.46■■□□□ 1.19
SSU72-203ENST00000378725 DDRGK1Q96HY6 314 aa22.46■■□□□ 1.19
SSU72-203ENST00000378725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.46■■□□□ 1.198e-6■■□□□ 11.4
SSU72-203ENST00000378725 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 USP17L21D6R901 530 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 FOXP2O15409 715 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 SBK1Q52WX2 424 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms