RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 MAP4K1Q92918 833 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 GNPATO15228 680 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 OPA1O60313 960 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■□□ 16.5
RPGR-203ENST00000378505 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 EVCP57679 992 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CCDC122Q5T0U0 273 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 NEBLO76041 1014 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 FERMT2Q96AC1 680 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 VPS16Q9H269 839 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 OGFRQ9NZT2 677 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 C17orf53Q8N3J3 647 aaPredicted RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 EYA3Q99504 573 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CCDC65Q8IXS2 484 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 GPT2Q8TD30 523 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 BICD1Q96G01 975 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 IVLP07476 585 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CUL4AQ13619 759 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CNBD1Q8NA66 436 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 ZMYND15Q9H091 742 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 FAM13AO94988 1023 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TUBB2AQ13885 445 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 POSTNQ15063 836 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.38
RPGR-203ENST00000378505 CTNND2Q9UQB3 1225 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 PDE4DQ08499 809 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 TRAF5O00463 557 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 VAV2P52735 878 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PPP2R3AQ06190 1150 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PAK1Q13153 545 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 USP6P35125 1406 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 NR1I2O75469 434 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CTSWP56202 376 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZNF500O60304 480 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CAPN2P17655 700 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 AATFQ9NY61 560 aaKnown RBP eCLIP12.69□□□□□ -0.38
RPGR-203ENST00000378505 DBNLQ9UJU6 430 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 TSGA10Q9BZW7 698 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 UFL1O94874 794 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 FGAP02671 866 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PDE6AP16499 860 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ADCK5Q3MIX3 580 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 DDX12PQ92771 950 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 GPR108Q9NPR9 543 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms