RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 MAP4K1Q92918 833 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
RPGR-203ENST00000378505 GNPATO15228 680 aa12.73□□□□□ -0.37
RPGR-203ENST00000378505 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 OPA1O60313 960 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■□□ 16.5
RPGR-203ENST00000378505 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 EVCP57679 992 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CCDC122Q5T0U0 273 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 NEBLO76041 1014 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 FERMT2Q96AC1 680 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 VPS16Q9H269 839 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 OGFRQ9NZT2 677 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 C17orf53Q8N3J3 647 aaPredicted RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
RPGR-203ENST00000378505 EYA3Q99504 573 aa12.72□□□□□ -0.37
RPGR-203ENST00000378505 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CCDC65Q8IXS2 484 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 GPT2Q8TD30 523 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 BICD1Q96G01 975 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 IVLP07476 585 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CUL4AQ13619 759 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 CNBD1Q8NA66 436 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 ZMYND15Q9H091 742 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
RPGR-203ENST00000378505 FAM13AO94988 1023 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TUBB2AQ13885 445 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 POSTNQ15063 836 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.38
RPGR-203ENST00000378505 CTNND2Q9UQB3 1225 aa12.71□□□□□ -0.38
RPGR-203ENST00000378505 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 PDE4DQ08499 809 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 TRAF5O00463 557 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
RPGR-203ENST00000378505 VAV2P52735 878 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PPP2R3AQ06190 1150 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 PAK1Q13153 545 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 USP6P35125 1406 aa12.7□□□□□ -0.38
RPGR-203ENST00000378505 NR1I2O75469 434 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CTSWP56202 376 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZNF500O60304 480 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CAPN2P17655 700 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 AATFQ9NY61 560 aaKnown RBP eCLIP12.69□□□□□ -0.38
RPGR-203ENST00000378505 DBNLQ9UJU6 430 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 TSGA10Q9BZW7 698 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
RPGR-203ENST00000378505 UFL1O94874 794 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 FGAP02671 866 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 PDE6AP16499 860 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ADCK5Q3MIX3 580 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 DDX12PQ92771 950 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 GPR108Q9NPR9 543 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
RPGR-203ENST00000378505 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms