RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CAPZA3Q96KX2 299 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 IMPACTQ9P2X3 320 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 ADGRB3O60242 1522 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
PRDM16-203ENST00000378391 NAPAP54920 295 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 RBBP5Q15291 538 aaKnown RBP16.29■□□□□ 0.2
PRDM16-203ENST00000378391 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 ATP7BP35670 1465 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 PPP1R2P41236 205 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 TFCP2Q12800 502 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
PRDM16-203ENST00000378391 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
PRDM16-203ENST00000378391 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
PRDM16-203ENST00000378391 TNNC1P63316 161 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 FERMT1Q9BQL6 677 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 NR1I2O75469 434 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 TRIM14Q14142 442 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 CDK12Q9NYV4 1490 aaPredicted RBP16.28■□□□□ 0.2
PRDM16-203ENST00000378391 CFAP58Q5T655 872 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 DTHD1Q6ZMT9 781 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 PPFIBP2Q8ND30 876 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
PRDM16-203ENST00000378391 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
PRDM16-203ENST00000378391 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
PRDM16-203ENST00000378391 CCDC6Q16204 474 aa16.27■□□□□ 0.2
PRDM16-203ENST00000378391 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
PRDM16-203ENST00000378391 ZEB2O60315 1214 aa16.27■□□□□ 0.2
PRDM16-203ENST00000378391 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
PRDM16-203ENST00000378391 LARGE1O95461 756 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 ANO1Q5XXA6 986 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 CERS3Q8IU89 383 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.19
PRDM16-203ENST00000378391 PPP1R14CQ8TAE6 165 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 ATP2A1O14983 1001 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 GCKP35557 465 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 ERCC6L2Q5T890 1561 aa16.27■□□□□ 0.19
PRDM16-203ENST00000378391 JAK2O60674 1132 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 GNA11P29992 359 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 IGSF22Q8N9C0 903 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 IQCGQ9H095 443 aaKnown RBP16.26■□□□□ 0.19
PRDM16-203ENST00000378391 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRDM16-203ENST00000378391 A6NNZ2 444 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 FANCCQ00597 558 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
PRDM16-203ENST00000378391 TUBB8Q3ZCM7 444 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 ARID5AQ03989 594 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 NAPGQ99747 312 aaPredicted RBP16.26■□□□□ 0.19
PRDM16-203ENST00000378391 BICC1Q9H694 974 aaKnown RBP16.26■□□□□ 0.19
PRDM16-203ENST00000378391 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
PRDM16-203ENST00000378391 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 CEP120Q8N960 986 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 MLKLQ8NB16 471 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 TMEM87BQ96K49 555 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 KCNH3Q9ULD8 1083 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 IFT81Q8WYA0 676 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 FAM114A2Q9NRY5 505 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
PRDM16-203ENST00000378391 ARHGAP6O43182 974 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 HOXB7P09629 217 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
PRDM16-203ENST00000378391 MTRF1LQ9UGC7 380 aaKnown RBP16.25■□□□□ 0.19
PRDM16-203ENST00000378391 LRRC8AQ8IWT6 810 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CHMP2AO43633 222 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 MCM7P33993 719 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CHMP4BP1P59074 171 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 SBNO1A3KN83 1393 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CHD1O14646 1710 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 SLMAPQ14BN4 828 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CHRNA2Q15822 529 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 WHAMMQ8TF30 809 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 TRMT1LQ7Z2T5 733 aaKnown RBP16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CADPS2Q86UW7 1296 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 CARD6Q9BX69 1037 aa16.24■□□□□ 0.19
PRDM16-203ENST00000378391 TNRQ92752 1358 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
PRDM16-203ENST00000378391 MKL2Q9ULH7 1088 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 CUTAO60888 179 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
PRDM16-203ENST00000378391 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
PRDM16-203ENST00000378391 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 DIXDC1Q155Q3 683 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
PRDM16-203ENST00000378391 B4GALNT4Q76KP1 1039 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms