RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MAP3K11Q16584 847 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 CRNKL1Q9BZJ0 848 aaKnown RBP15.96■□□□□ 0.15
CKAP2-202ENST00000378034 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 TRIM6-TRIM34B2RNG4 842 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 DCAF15Q66K64 600 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 TGFBRAP1Q8WUH2 860 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 OSBPL5Q9H0X9 879 aaPredicted RBP15.96■□□□□ 0.15
CKAP2-202ENST00000378034 DHX36Q9H2U1 1008 aaKnown RBP15.96■□□□□ 0.15
CKAP2-202ENST00000378034 AK9Q5TCS8 1911 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 TTLL12Q14166 644 aaPredicted RBP15.95■□□□□ 0.14
CKAP2-202ENST00000378034 ZFPM1Q8IX07 1006 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 FLT1P17948 1338 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 USP5P45974 858 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 IREB2P48200 963 aaKnown RBP15.95■□□□□ 0.14
CKAP2-202ENST00000378034 HUNKP57058 714 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
CKAP2-202ENST00000378034 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
CKAP2-202ENST00000378034 MBD4O95243 580 aa15.94■□□□□ 0.14
CKAP2-202ENST00000378034 CDAN1Q8IWY9 1227 aa15.94■□□□□ 0.14
CKAP2-202ENST00000378034 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
CKAP2-202ENST00000378034 RILPL2Q969X0 211 aa15.94■□□□□ 0.14
CKAP2-202ENST00000378034 CSRNP1Q96S65 589 aa15.94■□□□□ 0.14
CKAP2-202ENST00000378034 PUS7LQ9H0K6 701 aaKnown RBP15.94■□□□□ 0.14
CKAP2-202ENST00000378034 ANGEL1Q9UNK9 670 aaKnown RBP15.94■□□□□ 0.14
CKAP2-202ENST00000378034 USP2O75604 605 aaPredicted RBP15.93■□□□□ 0.14
CKAP2-202ENST00000378034 HTRA3P83110 453 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 SLFNL1Q499Z3 407 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 ZMYM1Q5SVZ6 1142 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 SH3BP5LQ7L8J4 393 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 MAPKAPK5Q8IW41 473 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 ATP8A2Q9NTI2 1148 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 DDTLA6NHG4 134 aaPredicted RBP15.93■□□□□ 0.14
CKAP2-202ENST00000378034 CHGBP05060 677 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 MAP3K10Q02779 954 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 OSBP2Q969R2 916 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
CKAP2-202ENST00000378034 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 HIP1O00291 1037 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 TBC1D12O60347 775 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 GNAT2P19087 354 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 ECE1P42892 770 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 PRKG1Q13976 671 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 RGMBQ6NW40 437 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 STRBPQ96SI9 672 aaKnown RBP15.92■□□□□ 0.14
CKAP2-202ENST00000378034 HELLSQ9NRZ9 838 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 PI4KBQ9UBF8 816 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 MKRN1Q9UHC7 482 aaKnown RBP15.92■□□□□ 0.14
CKAP2-202ENST00000378034 MYH1P12882 1939 aa15.92■□□□□ 0.14
CKAP2-202ENST00000378034 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 ANKRD13AQ8IZ07 590 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 DNAJC5GQ8N7S2 189 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 NAV1Q8NEY1 1877 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 GSPT1P15170 499 aaKnown RBP15.91■□□□□ 0.14
CKAP2-202ENST00000378034 FOXP4Q8IVH2 680 aaPredicted RBP15.91■□□□□ 0.14
CKAP2-202ENST00000378034 CCDC102AQ96A19 550 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 DDRGK1Q96HY6 314 aa15.91■□□□□ 0.14
CKAP2-202ENST00000378034 HERC5Q9UII4 1024 aaKnown RBP15.91■□□□□ 0.14
CKAP2-202ENST00000378034 GPAA1O43292 621 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 SDSP20132 328 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 MAP3K9P80192 1104 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 GIMAP6Q6P9H5 292 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 TTC6Q86TZ1 520 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.9■□□□□ 0.14
CKAP2-202ENST00000378034 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
CKAP2-202ENST00000378034 ZNF112Q9UJU3 913 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 SLC4A4Q9Y6R1 1079 aa15.9■□□□□ 0.14
CKAP2-202ENST00000378034 DDX60LQ5H9U9 1706 aaKnown RBP15.9■□□□□ 0.14
CKAP2-202ENST00000378034 M0R2C6 588 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 ZNF157P51786 506 aaPredicted RBP15.89■□□□□ 0.13
CKAP2-202ENST00000378034 METTL16Q86W50 562 aaKnown RBP15.89■□□□□ 0.13
CKAP2-202ENST00000378034 SDR42E1Q8WUS8 393 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 PALD1Q9ULE6 856 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 MCMDC2Q4G0Z9 681 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 CAPNS2Q96L46 248 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 EHD4Q9H223 541 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 SAP30BPQ9UHR5 308 aaKnown RBP15.89■□□□□ 0.13
CKAP2-202ENST00000378034 FZD1Q9UP38 647 aa15.89■□□□□ 0.13
CKAP2-202ENST00000378034 OTOFQ9HC10 1997 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 PRKAB2O43741 272 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
CKAP2-202ENST00000378034 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 SLC10A4Q96EP9 437 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 WRNIP1Q96S55 665 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 SEC62Q99442 399 aaKnown RBP15.88■□□□□ 0.13
CKAP2-202ENST00000378034 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
CKAP2-202ENST00000378034 DIAPH3Q9NSV4 1193 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 CSADQ9Y600 493 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 WDR33Q9C0J8 1336 aaKnown RBP15.88■□□□□ 0.13
CKAP2-202ENST00000378034 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
CKAP2-202ENST00000378034 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 SLC10A3P09131 477 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms