RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 AMOTL1Q8IY63 956 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 VEZTQ9HBM0 779 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 ZMYM6O95789 1325 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 TCP10Q12799 353 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 NFIAQ12857 509 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 DDX4Q9NQI0 724 aaKnown RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 ARPP21Q9UBL0 812 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 ZNF70Q9UC06 446 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 BAZ2AQ9UIF9 1905 aaKnown RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 ECM29Q5VYK3 1845 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 CYP2D7A0A087X1C5 515 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 ZBED3Q96IU2 234 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 MKRN1Q9UHC7 482 aaKnown RBP15.4■□□□□ 0.06
CBWD3-203ENST00000377344 TAF6LQ9Y6J9 622 aa15.4■□□□□ 0.06
CBWD3-203ENST00000377344 NAV1Q8NEY1 1877 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 ANAPC15P60006 121 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 CTDSPL2Q05D32 466 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 PPARAQ07869 468 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
CBWD3-203ENST00000377344 CYP2D6P10635 497 aa15.38■□□□□ 0.05
CBWD3-203ENST00000377344 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-203ENST00000377344 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-203ENST00000377344 FOCADQ5VW36 1801 aa15.38■□□□□ 0.05
CBWD3-203ENST00000377344 KCNB2Q92953 911 aa15.38■□□□□ 0.05
CBWD3-203ENST00000377344 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-203ENST00000377344 JAKMIP1Q96N16 626 aaKnown RBP15.38■□□□□ 0.05
CBWD3-203ENST00000377344 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
CBWD3-203ENST00000377344 FAM198AQ9UFP1 575 aa15.38■□□□□ 0.05
CBWD3-203ENST00000377344 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
CBWD3-203ENST00000377344 EVX2Q03828 476 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 KRT32Q14532 448 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 TBC1D10CQ8IV04 446 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 ZFPM1Q8IX07 1006 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 TOMM22Q9NS69 142 aa15.37■□□□□ 0.05
CBWD3-203ENST00000377344 SCAF8Q9UPN6 1271 aaKnown RBP15.37■□□□□ 0.05
CBWD3-203ENST00000377344 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
CBWD3-203ENST00000377344 ASTN2O75129 1339 aaPredicted RBP15.37■□□□□ 0.05
CBWD3-203ENST00000377344 E7EWF7 191 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 SMIM22K7EJ46 135 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
CBWD3-203ENST00000377344 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 KIF2CQ99661 725 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 MYH1P12882 1939 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 LAMA4Q16363 1823 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 IQCA1LA6NCM1 817 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 ENTPD3O75355 529 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 HLA-DOAP06340 250 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
CBWD3-203ENST00000377344 PSMA5P28066 241 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 PLCD1P51178 756 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-203ENST00000377344 TRDNQ13061 729 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 TSGA10IPQ3SY00 556 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 ANGEL2Q5VTE6 544 aaKnown RBP15.36■□□□□ 0.05
CBWD3-203ENST00000377344 MFSD6Q6ZSS7 791 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 TTC6Q86TZ1 520 aa15.36■□□□□ 0.05
CBWD3-203ENST00000377344 UPF3BQ9BZI7 483 aaKnown RBP15.36■□□□□ 0.05
CBWD3-203ENST00000377344 LAMB1P07942 1786 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
CBWD3-203ENST00000377344 EPHX2P34913 555 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 TNNI2P48788 182 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 TNFAIP1Q13829 316 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 RRP12Q5JTH9 1297 aaKnown RBP15.35■□□□□ 0.05
CBWD3-203ENST00000377344 AKNAD1Q5T1N1 836 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
CBWD3-203ENST00000377344 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 NEK1Q96PY6 1258 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 DHX36Q9H2U1 1008 aaKnown RBP15.35■□□□□ 0.05
CBWD3-203ENST00000377344 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-203ENST00000377344 INCENPQ9NQS7 918 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
CBWD3-203ENST00000377344 DDTLA6NHG4 134 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-203ENST00000377344 CPA1P15085 419 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 RABEP1Q15276 862 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 NCOA7Q8NI08 942 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
CBWD3-203ENST00000377344 DDX60LQ5H9U9 1706 aaKnown RBP15.34■□□□□ 0.05
CBWD3-203ENST00000377344 PRDM1O75626 825 aa15.33■□□□□ 0.05
CBWD3-203ENST00000377344 NEK4P51957 841 aa15.33■□□□□ 0.05
CBWD3-203ENST00000377344 PDE4BQ07343 736 aa15.33■□□□□ 0.05
CBWD3-203ENST00000377344 EAPPQ56P03 285 aaPredicted RBP15.33■□□□□ 0.05
CBWD3-203ENST00000377344 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.05
CBWD3-203ENST00000377344 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.05
CBWD3-203ENST00000377344 STAG1Q8WVM7 1258 aa15.33■□□□□ 0.05
CBWD3-203ENST00000377344 TMEM39BQ9GZU3 492 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms