RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
CLCN6-203ENST00000376490 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
CLCN6-203ENST00000376490 ANTXR1Q9H6X2 564 aa17.43■□□□□ 0.38
CLCN6-203ENST00000376490 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
CLCN6-203ENST00000376490 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
CLCN6-203ENST00000376490 IFIT2P09913 472 aaKnown RBP17.42■□□□□ 0.38
CLCN6-203ENST00000376490 INPP5BP32019 993 aa17.42■□□□□ 0.38
CLCN6-203ENST00000376490 ADGRA1Q86SQ6 560 aa17.42■□□□□ 0.38
CLCN6-203ENST00000376490 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
CLCN6-203ENST00000376490 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
CLCN6-203ENST00000376490 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 SH3RF3Q8TEJ3 882 aaPredicted RBP17.41■□□□□ 0.38
CLCN6-203ENST00000376490 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 R3HDMLQ9H3Y0 253 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLCN6-203ENST00000376490 ZNF112Q9UJU3 913 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 MYH1P12882 1939 aa17.41■□□□□ 0.38
CLCN6-203ENST00000376490 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLCN6-203ENST00000376490 CAPN15O75808 1086 aa17.4■□□□□ 0.38
CLCN6-203ENST00000376490 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
CLCN6-203ENST00000376490 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
CLCN6-203ENST00000376490 MS4A4AQ96JQ5 239 aa17.4■□□□□ 0.38
CLCN6-203ENST00000376490 PTPN18Q99952 460 aa17.4■□□□□ 0.38
CLCN6-203ENST00000376490 NOL10Q9BSC4 688 aaKnown RBP17.4■□□□□ 0.38
CLCN6-203ENST00000376490 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
CLCN6-203ENST00000376490 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
CLCN6-203ENST00000376490 BAG3O95817 575 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CLCN6-203ENST00000376490 CYP7A1P22680 504 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 PPP4CP60510 307 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 LRRCC1Q9C099 1032 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 MYH7P12883 1935 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
CLCN6-203ENST00000376490 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
CLCN6-203ENST00000376490 TESPA1A2RU30 521 aaPredicted RBP17.38■□□□□ 0.37
CLCN6-203ENST00000376490 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
CLCN6-203ENST00000376490 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
CLCN6-203ENST00000376490 MAP3K10Q02779 954 aa17.38■□□□□ 0.37
CLCN6-203ENST00000376490 MAGEB6Q8N7X4 407 aa17.38■□□□□ 0.37
CLCN6-203ENST00000376490 CRBNQ96SW2 442 aa17.38■□□□□ 0.37
CLCN6-203ENST00000376490 PHIPQ8WWQ0 1821 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 IRF6O14896 467 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 IGSF3O75054 1194 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 GTF2A2P52657 109 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLCN6-203ENST00000376490 TGFBRAP1Q8WUH2 860 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
CLCN6-203ENST00000376490 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
CLCN6-203ENST00000376490 CCL15-CCL14A0A0B4J2E2 113 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 GPR25O00155 361 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 GOLIM4O00461 696 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 PLCG2P16885 1265 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 MAP3K12Q12852 859 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 DGKZQ13574 1117 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 CCL15Q16663 113 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
CLCN6-203ENST00000376490 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
CLCN6-203ENST00000376490 DNAJC2Q99543 621 aaKnown RBP17.36■□□□□ 0.37
CLCN6-203ENST00000376490 CFHR5Q9BXR6 569 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
CLCN6-203ENST00000376490 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 ATP5JP18859 108 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 PPATQ06203 517 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 PPIL2Q13356 520 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
CLCN6-203ENST00000376490 NOL9Q5SY16 702 aaKnown RBP17.35■□□□□ 0.37
CLCN6-203ENST00000376490 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 MIGA1Q8NAN2 632 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 MCOLN1Q9GZU1 580 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 PTPRFP10586 1907 aa17.35■□□□□ 0.37
CLCN6-203ENST00000376490 TBC1D12O60347 775 aa17.34■□□□□ 0.37
CLCN6-203ENST00000376490 ABHD8Q96I13 439 aa17.34■□□□□ 0.37
CLCN6-203ENST00000376490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLCN6-203ENST00000376490 CETPP11597 493 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 CRHR2Q13324 411 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 SNAPC2Q13487 334 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.36
CLCN6-203ENST00000376490 SLC9C2Q5TAH2 1124 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 FAM43AQ8N2R8 423 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
CLCN6-203ENST00000376490 COL2A1P02458 1487 aaPredicted RBP17.32■□□□□ 0.36
CLCN6-203ENST00000376490 FLT1P17948 1338 aa17.32■□□□□ 0.36
CLCN6-203ENST00000376490 CTNND1O60716 968 aaKnown RBP17.32■□□□□ 0.36
CLCN6-203ENST00000376490 FKTNO75072 461 aa17.32■□□□□ 0.36
CLCN6-203ENST00000376490 SCYL3Q8IZE3 742 aa17.32■□□□□ 0.36
CLCN6-203ENST00000376490 HAUS7Q99871 368 aa17.32■□□□□ 0.36
CLCN6-203ENST00000376490 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
CLCN6-203ENST00000376490 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
CLCN6-203ENST00000376490 BTBD19C9JJ37 291 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 PDE6AP16499 860 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 PTPRAP18433 802 aa17.31■□□□□ 0.36
CLCN6-203ENST00000376490 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms