RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 VAT1LQ9HCJ6 419 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 COL15A1P39059 1388 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 TCHHQ07283 1943 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
ZNF549-202ENST00000376233 NR5A1Q13285 461 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 LCORLQ8N3X6 602 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 CDC27P30260 824 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 SLC39A14Q15043 492 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
ZNF549-202ENST00000376233 PLIN2Q99541 437 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 PCDHA5Q9Y5H7 936 aa12.14□□□□□ -0.47
ZNF549-202ENST00000376233 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 GNAT2P19087 354 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 GRAMD1CQ8IYS0 662 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 FANCLQ9NW38 375 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 NFE2L3Q9Y4A8 694 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 A0A1W2PQ27 194 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 A0A1W2PQ64 194 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 A0A1W2PQD8 194 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 ERICH4A6NGS2 130 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 SH2B2O14492 632 aaPredicted RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 ELF2Q15723 593 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 USP27XA6NNY8 438 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 MCM7P33993 719 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 NEDD4P46934 1319 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 ARHGAP29Q52LW3 1261 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
ZNF549-202ENST00000376233 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
ZNF549-202ENST00000376233 CUTAO60888 179 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 DEXIO95424 95 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 CHRNDQ07001 517 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 RILPL1Q5EBL4 403 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 UBE2Q2LH0YL09 131 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 CASQ1P31415 396 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 ANTXR2P58335 489 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 PPARAQ07869 468 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
ZNF549-202ENST00000376233 TNKSO95271 1327 aa12.12□□□□□ -0.47
ZNF549-202ENST00000376233 COBLO75128 1261 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 FANCBQ8NB91 859 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 USP17L21D6R901 530 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 N4BP3O15049 544 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 KRT2P35908 639 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 IQCB1Q15051 598 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 LZTFL1Q9NQ48 299 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 MAGEC2Q9UBF1 373 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 NWD1Q149M9 1564 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 POSTNQ15063 836 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 LONRF3Q496Y0 759 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 WDHD1O75717 1129 aaPredicted RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 DYNLL1P63167 89 aaKnown RBP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 PDE4BQ07343 736 aa12.11□□□□□ -0.47
ZNF549-202ENST00000376233 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF549-202ENST00000376233 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 SIK1P57059 783 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 KIF4BQ2VIQ3 1234 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 PIK3AP1Q6ZUJ8 805 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 CYP19A1P11511 503 aaPredicted RBP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms