RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NBPF10Q6P3W6 841 aaKnown RBP20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 NBPF15Q8N660 670 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 ACBD3Q9H3P7 528 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 C1orf167Q5SNV9 1468 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 NLGN1Q8N2Q7 840 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 ERMNQ8TAM6 284 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 PKD2L1Q9P0L9 805 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 ZMYM1Q5SVZ6 1142 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 RBSNQ9H1K0 784 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 YEATS4O95619 227 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 TNNT3P45378 269 aaPredicted RBP20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 C2CD5Q86YS7 1000 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 PI4K2BQ8TCG2 481 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 LMBRD1Q9NUN5 540 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 NEXMIFQ5QGS0 1516 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 MAST3O60307 1309 aa20.44■□□□□ 0.86
PTPDC1-202ENST00000375360 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 FAM160A1Q05DH4 1040 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 ERVV-1B6SEH8 477 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 PRKAB2O43741 272 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 SLC1A4P43007 532 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 GSDMDP57764 484 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 PUS7LQ9H0K6 701 aaKnown RBP20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 CDC42BPGQ6DT37 1551 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 ZBTB21Q9ULJ3 1066 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 TNS3Q68CZ2 1445 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 GPR108Q9NPR9 543 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 MAPK8IP1Q9UQF2 711 aa20.43■□□□□ 0.86
PTPDC1-202ENST00000375360 CPS1P31327 1500 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 TRIM21P19474 475 aaKnown RBP20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 STAMQ92783 540 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 PSMA7O14818 248 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 PDE6BP35913 854 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 DYNLL1P63167 89 aaKnown RBP20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 PPP4R3AQ6IN85 833 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 RMND1Q9NWS8 449 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 TNKSO95271 1327 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 KIF5CO60282 957 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 UBE3CQ15386 1083 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
PTPDC1-202ENST00000375360 SKILP12757 684 aa20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 POLR2DO15514 142 aaKnown RBP20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 WDHD1O75717 1129 aaPredicted RBP20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 MRPL12P52815 198 aaKnown RBP20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 TRAF1Q13077 416 aa20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 GPR101Q96P66 508 aaPredicted RBP20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 CPXCR1Q8N123 301 aa20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
PTPDC1-202ENST00000375360 M0R2C6 588 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 TEKT1Q969V4 418 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 TMEM63CQ9P1W3 806 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 TXKP42681 527 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 DLGAP5Q15398 846 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 IFNKQ9P0W0 207 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 MTMR6Q9Y217 621 aa20.4■□□□□ 0.86
PTPDC1-202ENST00000375360 TXLNBQ8N3L3 684 aa20.39■□□□□ 0.86
PTPDC1-202ENST00000375360 AXDND1Q5T1B0 1012 aaPredicted RBP20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 ZSWIM4Q9H7M6 989 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 PTGS1P23219 599 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 TAF4BQ92750 862 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 RXRBP28702 533 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 BTDP43251 543 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 FANCBQ8NB91 859 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 ZNF274Q96GC6 653 aaPredicted RBP20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 USP28Q96RU2 1077 aa20.39■□□□□ 0.85
PTPDC1-202ENST00000375360 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 RASGRF1Q13972 1273 aa20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 SSH2Q76I76 1423 aa20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 PDIA3P30101 505 aaKnown RBP20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 THRAP3Q9Y2W1 955 aaKnown RBP20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 PTPRUQ92729 1446 aa20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 ARID4AP29374 1257 aaPredicted RBP20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 USH1GQ495M9 461 aa20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 ATL3Q6DD88 541 aa20.38■□□□□ 0.85
PTPDC1-202ENST00000375360 TTC38Q5R3I4 469 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 AFF2P51816 1311 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 AKR1B10O60218 316 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 NEMFO60524 1076 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 CCNT1O60563 726 aaKnown RBP20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 SCRN1Q12765 414 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 LRRC27Q9C0I9 530 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.37■□□□□ 0.852e-7■■■■■ 93.2
PTPDC1-202ENST00000375360 DIXDC1Q155Q3 683 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 MYSM1Q5VVJ2 828 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 CENPHQ9H3R5 247 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 DBNDD1Q9H9R9 158 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 ARPP21Q9UBL0 812 aaPredicted RBP20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 BTBD18B2RXH4 712 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 GNG11P61952 73 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 FAM193AP78312 1265 aa20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
PTPDC1-202ENST00000375360 CYP2D7A0A087X1C5 515 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms