RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TRIM63Q969Q1 353 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 UNC45AQ9H3U1 944 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 STK38LQ9Y2H1 464 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 ANKRD30BQ9BXX2 1392 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 SOGA1O94964 1423 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 PARD6BQ9BYG5 372 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 FAM192AQ9GZU8 254 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 FAM204AQ9H8W3 233 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 APOEP02649 317 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 TMEM266Q2M3C6 531 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 C1orf141Q5JVX7 400 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 IGSF22Q8N9C0 903 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 IQUBQ8NA54 791 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 GRAMD1AQ96CP6 724 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 ANKRD2Q9GZV1 360 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 IL1RAPL1Q9NZN1 696 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 PHLPP2Q6ZVD8 1323 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 TRIM37O94972 964 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 LONRF2Q1L5Z9 754 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 BBOF1Q8ND07 529 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 CFAP36Q96G28 342 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 CLSTN2Q9H4D0 955 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 KRT7P08729 469 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 VCAM1P19320 739 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 INF2Q27J81 1249 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 SLC12A7Q9Y666 1083 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 ARHGAP42A6NI28 874 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 SNUPNO95149 360 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 KRT6AP02538 564 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 KRT6BP04259 564 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 KRT2P35908 639 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 KRT6CP48668 564 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 CCDC15Q0P6D6 951 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 TEFQ10587 303 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 PPP1R42Q7Z4L9 355 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 ANKRD35Q8N283 1001 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 TERB1Q8NA31 727 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■■■ 38.4
UBR4-204ENST00000375254 SERPINI1Q99574 410 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 LMBRD1Q9NUN5 540 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 DTNBO60941 627 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 PAPOLBQ9NRJ5 636 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 KIF9Q9HAQ2 790 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSC22D4Q9Y3Q8 395 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 ENO4A6NNW6 628 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 KDM1AO60341 852 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 ZNF711Q9Y462 761 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 C8orf74Q6P047 294 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSPY2A6NKD2 308 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSPY3P0CV98 308 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSPY8P0CW00 308 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 CCND1P24385 295 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSPY1Q01534 308 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 INPP1P49441 399 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SYCP2LQ5T4T6 812 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 EPSTI1Q96J88 318 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 PPANQ9NQ55 473 aaKnown RBP7.34□□□□□ -1.23
UBR4-204ENST00000375254 IL16Q14005 1332 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SPTLC2O15270 562 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 KLC1Q07866 573 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 CCDC124Q96CT7 223 aaKnown RBP7.34□□□□□ -1.23
UBR4-204ENST00000375254 TSPYL4Q9UJ04 414 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 ST5P78524 1137 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 PPP1R14BQ96C90 147 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TMEM51Q9NW97 253 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 G3V3G9 751 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 STX2P32856 288 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 DCAF8Q5TAQ9 597 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 TRIM55Q9BYV6 548 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SYBUQ9NX95 663 aa7.34□□□□□ -1.23
UBR4-204ENST00000375254 SMTNP53814 917 aa7.34□□□□□ -1.24
UBR4-204ENST00000375254 RPL13P26373 211 aaKnown RBP7.34□□□□□ -1.24
UBR4-204ENST00000375254 ABCD1P33897 745 aa7.34□□□□□ -1.24
UBR4-204ENST00000375254 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.24
UBR4-204ENST00000375254 SRLQ86TD4 932 aa7.34□□□□□ -1.24
UBR4-204ENST00000375254 ATG3Q9NT62 314 aa7.34□□□□□ -1.24
UBR4-204ENST00000375254 ARIH1Q9Y4X5 557 aaPredicted RBP7.34□□□□□ -1.24
UBR4-204ENST00000375254 ANGPTL3Q9Y5C1 460 aa7.34□□□□□ -1.24
UBR4-204ENST00000375254 FOSBP53539 338 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 SWT1Q5T5J6 900 aaKnown RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 ARHGEF18Q6ZSZ5 1173 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 SLC9C1Q4G0N8 1177 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 TEDDM1Q5T9Z0 273 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 THUMPD2Q9BTF0 503 aaKnown RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 FAM177BA6PVY3 158 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 TUBA4AP68366 448 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 AEBP2Q6ZN18 517 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 TMEM60Q9H2L4 133 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 GJC2Q5T442 439 aaPredicted RBP7.33□□□□□ -1.24
UBR4-204ENST00000375254 TRIML2Q8N7C3 387 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 CFAP61Q8NHU2 1237 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 TSC22D1Q15714 1073 aa7.33□□□□□ -1.24
UBR4-204ENST00000375254 GSTA5Q7RTV2 222 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms