RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 PICALMQ13492 652 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 NBPF12Q5TAG4 269 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 HOOK2Q96ED9 719 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 OSBPL5Q9H0X9 879 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 COL2A1P02458 1487 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 GPAA1O43292 621 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 NF2P35240 595 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 USP5P45974 858 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 CST9Q5W186 159 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 DHX36Q9H2U1 1008 aaKnown RBP13.65□□□□□ -0.22
HSPG2-202ENST00000374676 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
HSPG2-202ENST00000374676 FLT1P17948 1338 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 A0A0D9SFI3 127 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
HSPG2-202ENST00000374676 PRKAB2O43741 272 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
HSPG2-202ENST00000374676 CHMLP26374 656 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 APLP1P51693 650 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 FKBP1BP68106 108 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-202ENST00000374676 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
HSPG2-202ENST00000374676 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
HSPG2-202ENST00000374676 DDTLA6NHG4 134 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-202ENST00000374676 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
HSPG2-202ENST00000374676 GSG1L2A8MUP6 293 aa13.63□□□□□ -0.23
HSPG2-202ENST00000374676 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
HSPG2-202ENST00000374676 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
HSPG2-202ENST00000374676 SDR42E1Q8WUS8 393 aa13.63□□□□□ -0.23
HSPG2-202ENST00000374676 RUFY2Q8WXA3 655 aa13.63□□□□□ -0.23
HSPG2-202ENST00000374676 GBA2Q9HCG7 927 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-202ENST00000374676 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 UNCXA6NJT0 531 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-202ENST00000374676 TBC1D12O60347 775 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
HSPG2-202ENST00000374676 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-202ENST00000374676 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-202ENST00000374676 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 ZNF408Q9H9D4 720 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 PI4KBQ9UBF8 816 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 RAD50Q92878 1312 aa13.62□□□□□ -0.23
HSPG2-202ENST00000374676 PAPPA2Q9BXP8 1791 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 USP2O75604 605 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-202ENST00000374676 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 ALX1Q15699 326 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 IFNL3Q8IZI9 196 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 NACAP1Q9BZK3 213 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
HSPG2-202ENST00000374676 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
HSPG2-202ENST00000374676 SIPA1L1O43166 1804 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 POLR3DP05423 398 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-202ENST00000374676 HSPA6P17066 643 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 ARMC9Q7Z3E5 817 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-202ENST00000374676 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 EHD4Q9H223 541 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
HSPG2-202ENST00000374676 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
HSPG2-202ENST00000374676 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
HSPG2-202ENST00000374676 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 USP17L21D6R901 530 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 FOXP2O15409 715 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 SGSM2O43147 1006 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 CDC45O75419 566 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 APPP05067 770 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 IREB2P48200 963 aaKnown RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 PLCD1P51178 756 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 TTLL12Q14166 644 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 LDLRAD1Q5T700 205 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 CTR9Q6PD62 1173 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms