RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CNNM3Q8NE01 707 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 RAB3IL1Q8TBN0 382 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 FERMT2Q96AC1 680 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 NAP1L3Q99457 506 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 SBNO1A3KN83 1393 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MAP3K4Q9Y6R4 1608 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 BCORL1Q5H9F3 1711 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 INO80Q9ULG1 1556 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MTIF2P46199 727 aaKnown RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 SH3BGRP55822 239 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MTHFSDQ2M296 383 aaKnown RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 NSMFQ6X4W1 530 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 FMNL3Q8IVF7 1028 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MICALL2Q8IY33 904 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 CALML4Q96GE6 196 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 COMMD10Q9Y6G5 202 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 USH1CQ9Y6N9 552 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC194A0A1B0GVG4 234 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 KLHL40Q2TBA0 621 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 HS1BP3Q53T59 392 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC121Q6ZUS5 278 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 LMBR1Q8WVP7 490 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 SELENOOQ9BVL4 669 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 GBA2Q9HCG7 927 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 TRIM75PA6NK02 468 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 ITGA6P23229 1130 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 ALDH3A1P30838 453 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 NLRP5P59047 1200 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 MAP1SQ66K74 1059 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 CWC27Q6UX04 472 aaKnown RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 RSRC1Q96IZ7 334 aaKnown RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 STIM2Q9P246 746 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 EVI5O60447 810 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TMPOP42166 694 aaKnown RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 RSPH3Q86UC2 560 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TMCO5BA8MYB1 307 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 KIF5BP33176 963 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 FCGRTP55899 365 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC40Q4G0X9 1142 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 CEP128Q6ZU80 1094 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 PPFIBP2Q8ND30 876 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TRIM6Q9C030 488 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 C1orf115Q9H7X2 142 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TCP11L1Q9NUJ3 509 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 SETD1BQ9UPS6 1966 aaKnown RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 XDHP47989 1333 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 ARHGEF25Q86VW2 580 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 C16orf45Q96MC5 204 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 ZSCAN16Q9H4T2 348 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 HMG20BQ9P0W2 317 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TSKSQ9UJT2 592 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 IQSEC2Q5JU85 1478 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 A0A1W2PRG0 241 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 EBAG9O00559 213 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 ZFYP08048 801 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TMC6Q7Z403 805 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 UBE2HP62256 183 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 RASSF7Q02833 373 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 CAMK4Q16566 473 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 HACE1Q8IYU2 909 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 TRIM47Q96LD4 638 aa7.1□□□□□ -1.27
PTPN3-202ENST00000374541 A0A1B0GUA9 196 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 KIF3CO14782 793 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 TOMM70O94826 608 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 SSRP1Q08945 709 aaKnown RBP7.09□□□□□ -1.27
PTPN3-202ENST00000374541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTPN3-202ENST00000374541 USP25Q9UHP3 1055 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 ZBTB1Q9Y2K1 713 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 PTCH1Q13635 1447 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 ANKARQ7Z5J8 1434 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 ROBO2Q9HCK4 1378 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 CLCN1P35523 988 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
PTPN3-202ENST00000374541 FSIP1Q8NA03 581 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 PIGBQ92521 554 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 AZI2Q9H6S1 392 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 MYO3BQ8WXR4 1341 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
PTPN3-202ENST00000374541 UNC13BO14795 1591 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 GNG11P61952 73 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC102BQ68D86 513 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 CDCA7LQ96GN5 454 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 RICTORQ6R327 1708 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 ZWINTO95229 277 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 PLXNC1O60486 1568 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 MACROD2A1Z1Q3 448 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 TACC1O75410 805 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 PLBD2Q8NHP8 589 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 TBC1D5Q92609 795 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 BICD1Q96G01 975 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 JADE2Q9NQC1 790 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 CPSF2Q9P2I0 782 aaKnown RBP7.09□□□□□ -1.27
PTPN3-202ENST00000374541 ZNRF3Q9ULT6 936 aa7.09□□□□□ -1.27
PTPN3-202ENST00000374541 SPATA31D1Q6ZQQ2 1576 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 ADCY5O95622 1261 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 MXRA7P84157 204 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms