RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 KIF23Q02241 960 aaPredicted RBP16.18■□□□□ 0.18
HMGCL-203ENST00000374490 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 DHX8Q14562 1220 aaKnown RBP16.18■□□□□ 0.18
HMGCL-203ENST00000374490 ZRSR1Q15695 479 aaKnown RBP16.18■□□□□ 0.18
HMGCL-203ENST00000374490 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 PI16Q6UXB8 463 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 BPIFA3Q9BQP9 254 aa16.18■□□□□ 0.18
HMGCL-203ENST00000374490 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
HMGCL-203ENST00000374490 RTL9Q8NET4 1388 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 TCRBV5S4A2TA0A5A2 114 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 C11orf57Q6ZUT1 292 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-203ENST00000374490 TBC1D10CQ8IV04 446 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 AIDAQ96BJ3 306 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 CNNM2Q9H8M5 875 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 C4AP0C0L4 1744 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 AKAP11Q9UKA4 1901 aa16.17■□□□□ 0.18
HMGCL-203ENST00000374490 STK36Q9NRP7 1315 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 ZPR1O75312 459 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 APPP05067 770 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 GNAT2P19087 354 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 PHKA1P46020 1223 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 SGMS1Q86VZ5 419 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 STRBPQ96SI9 672 aaKnown RBP16.16■□□□□ 0.18
HMGCL-203ENST00000374490 SDF4Q9BRK5 362 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 NID2Q14112 1375 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 PATL2C9JE40 543 aaKnown RBP16.16■□□□□ 0.18
HMGCL-203ENST00000374490 CMA1P23946 247 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 LIFRP42702 1097 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 TPM4P67936 248 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
HMGCL-203ENST00000374490 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 WASF1Q92558 559 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 KRT23Q9C075 422 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
HMGCL-203ENST00000374490 ZBTB43O43298 467 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 NTSR2O95665 410 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 TRIM29Q14134 588 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
HMGCL-203ENST00000374490 FAM13BQ9NYF5 915 aa16.15■□□□□ 0.18
HMGCL-203ENST00000374490 PPP6R2O75170 966 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 CYB5R4Q7L1T6 521 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.17
HMGCL-203ENST00000374490 MPHOSPH8Q99549 860 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 NAPBQ9H115 298 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 KIAA1468Q9P260 1216 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
HMGCL-203ENST00000374490 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 NDUFA8P51970 172 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 RCAN1P53805 252 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 GSDMDP57764 484 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
HMGCL-203ENST00000374490 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 OTUD7BQ6GQQ9 843 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
HMGCL-203ENST00000374490 A0A1B0GVL5 298 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 B4E1Z4 1266 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 NLRP12P59046 1061 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 TMEM67Q5HYA8 995 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 KRT40Q6A162 431 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 IGDCC4Q8TDY8 1250 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 IMPACTQ9P2X3 320 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 FAM237AA0A1B0GTK4 181 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 SART3Q15020 963 aaKnown RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-203ENST00000374490 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 IFNL3Q8IZI9 196 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
HMGCL-203ENST00000374490 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
HMGCL-203ENST00000374490 NEDD4P46934 1319 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 CCDC69A6NI79 296 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 ZNF202O95125 648 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 MBD4O95243 580 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 ADRA2BP18089 450 aa16.11■□□□□ 0.17
HMGCL-203ENST00000374490 RFC4P35249 363 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms