RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 SRCAPQ6ZRS2 3230 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 E7EWF7 191 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 DDX58O95786 925 aaKnown RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 KIF23Q02241 960 aaPredicted RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 GOLGA8FQ08AF8 430 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 GOLGA8DPQ0D2H9 430 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 MPRIPQ6WCQ1 1025 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 PDILTQ8N807 584 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 MLKLQ8NB16 471 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 TTF2Q9UNY4 1162 aaKnown RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 FECHP22830 423 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 VSNL1P62760 191 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 TNNI3KQ59H18 835 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 CCDC51Q96ER9 411 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 DBNLQ9UJU6 430 aaKnown RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 FPGT-TNNI3KV9GXZ4 949 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 KDM6AO15550 1401 aaPredicted RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
SNX12-202ENST00000374274 COL18A1P39060 1754 aa15.29■□□□□ 0.04
SNX12-202ENST00000374274 RNMTO43148 476 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 KIF1CO43896 1103 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 KARSQ15046 597 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 CCDC102BQ68D86 513 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 RNF40O75150 1001 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 POLR3DP05423 398 aaPredicted RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 ADKP55263 362 aaKnown RBP15.28■□□□□ 0.04
SNX12-202ENST00000374274 NR1I3Q14994 352 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 NT5DC1Q5TFE4 455 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNX12-202ENST00000374274 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
SNX12-202ENST00000374274 A0A1B0GTH6 734 aa15.27■□□□□ 0.04
SNX12-202ENST00000374274 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
SNX12-202ENST00000374274 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
SNX12-202ENST00000374274 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
SNX12-202ENST00000374274 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
SNX12-202ENST00000374274 NAPGQ99747 312 aaPredicted RBP15.27■□□□□ 0.04
SNX12-202ENST00000374274 SPEF2Q9C093 1822 aa15.27■□□□□ 0.04
SNX12-202ENST00000374274 WDR19Q8NEZ3 1342 aa15.27■□□□□ 0.04
SNX12-202ENST00000374274 PNOCQ13519 176 aa15.27■□□□□ 0.03
SNX12-202ENST00000374274 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.03
SNX12-202ENST00000374274 SHC4Q6S5L8 630 aa15.27■□□□□ 0.03
SNX12-202ENST00000374274 DESI2Q9BSY9 194 aa15.27■□□□□ 0.03
SNX12-202ENST00000374274 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
SNX12-202ENST00000374274 ERLIN2O94905 339 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
SNX12-202ENST00000374274 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 SYF2O95926 243 aaKnown RBP15.26■□□□□ 0.03
SNX12-202ENST00000374274 PTPAQ15257 358 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 RAPGEF4Q8WZA2 1011 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
SNX12-202ENST00000374274 NLRP2Q9NX02 1062 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 NFE2L3Q9Y4A8 694 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 PCDHA5Q9Y5H7 936 aa15.26■□□□□ 0.03
SNX12-202ENST00000374274 TARSL2A2RTX5 802 aaKnown RBP15.25■□□□□ 0.03
SNX12-202ENST00000374274 ERCC5P28715 1186 aaPredicted RBP15.25■□□□□ 0.03
SNX12-202ENST00000374274 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 CXorf56Q9H5V9 222 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 DONSONQ9NYP3 566 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
SNX12-202ENST00000374274 ADAMTS7Q9UKP4 1686 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 ZNF335Q9H4Z2 1342 aaPredicted RBP15.25■□□□□ 0.03
SNX12-202ENST00000374274 A6NNZ2 444 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 KIF28PB7ZC32 967 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 KCNQ3O43525 872 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
SNX12-202ENST00000374274 TUBB8Q3ZCM7 444 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 ANKRD20A12PQ8NF67 263 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 SUGCTQ9HAC7 445 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 LZTFL1Q9NQ48 299 aa15.25■□□□□ 0.03
SNX12-202ENST00000374274 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
SNX12-202ENST00000374274 SOWAHDA6NJG2 315 aa15.24■□□□□ 0.03
SNX12-202ENST00000374274 ANXA1P04083 346 aa15.24■□□□□ 0.03
SNX12-202ENST00000374274 C4AP0C0L4 1744 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms