RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 KRT81Q14533 505 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 MCM6Q14566 821 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 CAPZA3Q96KX2 299 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 HFM1A2PYH4 1435 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 ACRBPQ8NEB7 543 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 PABPC4Q13310 644 aaKnown RBP eCLIP10.1□□□□□ -0.79
CSMD2-205ENST00000373381 DDB1Q16531 1140 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 MCF2L2Q86YR7 1114 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
CSMD2-205ENST00000373381 DBN1Q16643 649 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 KRT19P08727 400 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
CSMD2-205ENST00000373381 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
CSMD2-205ENST00000373381 PKD2L1Q9P0L9 805 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 PTPREP23469 700 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 SUPT20HQ8NEM7 779 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 TUBBP07437 444 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 TNFAIP3P21580 790 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 DTHD1Q6ZMT9 781 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 PCK1P35558 622 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 PHEXP78562 749 aa10.1□□□□□ -0.79
CSMD2-205ENST00000373381 GTF2A1P52655 376 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 BBS5Q8N3I7 341 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 BAG1Q99933 345 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 FOXO3O43524 673 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 ALDH1L2Q3SY69 923 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 GJB2P29033 226 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 UBE2HP62256 183 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 CHMP2AO43633 222 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 LMNB1P20700 586 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 PNMA8AQ86V59 439 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 PPFIA4O75335 1185 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 P3H4Q92791 437 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 OPTNQ96CV9 577 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 GOLGA8QA0A0J9YX86 632 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 GOLGA8OA6NCC3 632 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 GOLGA8NF8WBI6 632 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 BCRP11274 1271 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 TEX12Q9BXU0 123 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 TMOD1P28289 359 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 RNF169Q8NCN4 708 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 H7C1D1 291 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 RBSNQ9H1K0 784 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 KHDRBS2Q5VWX1 349 aaKnown RBP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 FANCD2Q9BXW9 1451 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 SCYL1Q96KG9 808 aa10.09□□□□□ -0.79
CSMD2-205ENST00000373381 EIF2AQ9BY44 585 aaKnown RBP10.09□□□□□ -0.79
CSMD2-205ENST00000373381 URB1O60287 2271 aaKnown RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 TUBB4AP04350 444 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 ADPGKQ9BRR6 497 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 IQCB1Q15051 598 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 CNNM4Q6P4Q7 775 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 GLG1Q92896 1179 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 SRGAP2BP0DMP2 458 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 C16orf72Q14CZ0 275 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 ISM2Q6H9L7 571 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 LARGE2Q8N3Y3 721 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 KLF18A0A0U1RQI7 1052 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 TRAF5O00463 557 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 EFCAB14O75071 495 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 SYF2O95926 243 aaKnown RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 B4GALNT4Q76KP1 1039 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 RAB44Q7Z6P3 723 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 GNL1P36915 607 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 SH3BGRP55822 239 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 CCDC38Q502W7 563 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 SUFUQ9UMX1 484 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 NSFL1CQ9UNZ2 370 aaKnown RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 FAM76AQ8TAV0 307 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 BSPRYQ5W0U4 402 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 KRT28Q7Z3Y7 464 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 ANGPTL3Q9Y5C1 460 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 TLDC2A0PJX2 215 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 KIAA1841Q6NSI8 718 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-205ENST00000373381 RILPQ96NA2 401 aa10.08□□□□□ -0.8
CSMD2-205ENST00000373381 MYCLP12524 364 aaPredicted RBP10.07□□□□□ -0.8
CSMD2-205ENST00000373381 TMPOP42166 694 aaKnown RBP10.07□□□□□ -0.8
CSMD2-205ENST00000373381 PRPSAP1Q14558 356 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms