RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 TNNI2P48788 182 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 WWC2Q6AWC2 1192 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 IBTKQ9P2D0 1353 aaPredicted RBP12.31□□□□□ -0.44
CSMD2-204ENST00000373380 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 KRT83P78385 493 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 TMEM87BQ96K49 555 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 XPO4Q9C0E2 1151 aaKnown RBP12.31□□□□□ -0.44
CSMD2-204ENST00000373380 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
CSMD2-204ENST00000373380 ARHGEF28Q8N1W1 1705 aaKnown RBP12.31□□□□□ -0.44
CSMD2-204ENST00000373380 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CALM1P0DP23 149 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CALM2P0DP24 149 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CALM3P0DP25 149 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 DDB1Q16531 1140 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 ZNF500O60304 480 aaPredicted RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 HSF2BPO75031 334 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 LTKP29376 864 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CCDC122Q5T0U0 273 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 LRRC7Q96NW7 1537 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
CSMD2-204ENST00000373380 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 GPIHBP1Q8IV16 184 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
CSMD2-204ENST00000373380 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 ADD1P35611 737 aaKnown RBP12.29□□□□□ -0.44
CSMD2-204ENST00000373380 LETM2Q2VYF4 491 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 LRRC27Q9C0I9 530 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 DEXIO95424 95 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 TBC1D8BQ0IIM8 1120 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
CSMD2-204ENST00000373380 TERF1P54274 439 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 GSTO1P78417 241 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
CSMD2-204ENST00000373380 ERCC3P19447 782 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 HSPA2P54652 639 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 MTX1Q13505 466 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 SH3TC1Q8TE82 1336 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 NLRP12P59046 1061 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 MICALCLQ6ZW33 695 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 CUTAO60888 179 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 ARHGEF10O15013 1369 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 A0A087WWV3 80 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 CMTR1Q8N1G2 835 aaKnown RBP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
CSMD2-204ENST00000373380 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSMD2-204ENST00000373380 SHPRHQ149N8 1683 aa12.27□□□□□ -0.44
CSMD2-204ENST00000373380 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.44
CSMD2-204ENST00000373380 MICALL1Q8N3F8 863 aa12.27□□□□□ -0.44
CSMD2-204ENST00000373380 ADGRB2O60241 1585 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 ZEB2O60315 1214 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 PNOCQ13519 176 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 TPTE2Q6XPS3 522 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 PYCARDQ9ULZ3 195 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 PREX1Q8TCU6 1659 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.45
CSMD2-204ENST00000373380 KRT9P35527 623 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 ADALQ6DHV7 355 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 MLKLQ8NB16 471 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 ERMNQ8TAM6 284 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
CSMD2-204ENST00000373380 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
CSMD2-204ENST00000373380 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
CSMD2-204ENST00000373380 DSCC1Q9BVC3 393 aa12.26□□□□□ -0.45
CSMD2-204ENST00000373380 RASSF4Q9H2L5 321 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms