RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 BRMS1Q9HCU9 246 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 MAPK8IP1Q9UQF2 711 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 TRIM37O94972 964 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 ZNF202O95125 648 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 TNKSO95271 1327 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 FAM160A1Q05DH4 1040 aa15.22■□□□□ 0.03
NCDN-203ENST00000373253 RGPD1P0DJD0 1748 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 KIF28PB7ZC32 967 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 UFL1O94874 794 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 PNOCQ13519 176 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 GRAMD1CQ8IYS0 662 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 TGFBRAP1Q8WUH2 860 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
NCDN-203ENST00000373253 TRIM28Q13263 835 aaKnown RBP15.21■□□□□ 0.03
NCDN-203ENST00000373253 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 LLPHQ9BRT6 129 aaKnown RBP15.21■□□□□ 0.03
NCDN-203ENST00000373253 PYCARDQ9ULZ3 195 aa15.21■□□□□ 0.03
NCDN-203ENST00000373253 CDC25AP30304 524 aa15.21■□□□□ 0.02
NCDN-203ENST00000373253 EXOSC10Q01780 885 aaKnown RBP15.21■□□□□ 0.02
NCDN-203ENST00000373253 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.02
NCDN-203ENST00000373253 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.02
NCDN-203ENST00000373253 IFNKQ9P0W0 207 aa15.21■□□□□ 0.02
NCDN-203ENST00000373253 CAMTA2O94983 1202 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 MCM7P33993 719 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 UBE3CQ15386 1083 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 TRMT44Q8IYL2 757 aaKnown RBP15.2■□□□□ 0.02
NCDN-203ENST00000373253 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 EVX2Q03828 476 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 CCDC196A0A1B0GTZ2 297 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 ERVV-1B6SEH8 477 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 POLR2DO15514 142 aaKnown RBP15.2■□□□□ 0.02
NCDN-203ENST00000373253 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
NCDN-203ENST00000373253 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
NCDN-203ENST00000373253 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 MINPP1Q9UNW1 487 aa15.2■□□□□ 0.02
NCDN-203ENST00000373253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.19■□□□□ 0.02
NCDN-203ENST00000373253 GOLGA8FQ08AF8 430 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 GOLGA8DPQ0D2H9 430 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
NCDN-203ENST00000373253 SPATA31A1Q5TZJ5 1347 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 GSG1L2A8MUP6 293 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
NCDN-203ENST00000373253 PFKFB1P16118 471 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 ERCC3P19447 782 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 SLC44A5Q8NCS7 719 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 CNNM2Q9H8M5 875 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 VWA3AA6NCI4 1184 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 CASP1P29466 404 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 RASGRP4Q8TDF6 673 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
NCDN-203ENST00000373253 TPM2P07951 284 aa15.18■□□□□ 0.02
NCDN-203ENST00000373253 TXNRD3Q86VQ6 643 aa15.18■□□□□ 0.02
NCDN-203ENST00000373253 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
NCDN-203ENST00000373253 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
NCDN-203ENST00000373253 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
NCDN-203ENST00000373253 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
NCDN-203ENST00000373253 SSBP05455 408 aaKnown RBP eCLIP15.18■□□□□ 0.02
NCDN-203ENST00000373253 CCDC34Q96HJ3 373 aa15.18■□□□□ 0.02
NCDN-203ENST00000373253 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
NCDN-203ENST00000373253 SKILP12757 684 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 TNNT1P13805 278 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 TFAP4Q01664 338 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 PIK3AP1Q6ZUJ8 805 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 FAM205CA6NFA0 338 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
NCDN-203ENST00000373253 AP5Z1O43299 807 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 PDE4BQ07343 736 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 WASF1Q92558 559 aa15.17■□□□□ 0.02
NCDN-203ENST00000373253 OFD1O75665 1012 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
NCDN-203ENST00000373253 SCNN1DP51172 638 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 KIF23Q02241 960 aaPredicted RBP15.16■□□□□ 0.02
NCDN-203ENST00000373253 DOK7Q18PE1 504 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 FAM208AQ9UK61 1670 aaKnown RBP15.16■□□□□ 0.02
NCDN-203ENST00000373253 PLEKHA8P1O95397 391 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 MECOMQ03112 1051 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
NCDN-203ENST00000373253 NFIXQ14938 502 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
NCDN-203ENST00000373253 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 KCNH3Q9ULD8 1083 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 TCP10Q12799 353 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 FAM84BQ96KN1 310 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms