RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 AK7Q96M32 723 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 RNF41Q9H4P4 317 aaPredicted RBP19.72■□□□□ 0.75
VEGFA-205ENST00000372067 CNNM2Q9H8M5 875 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 PCDHA7Q9UN72 937 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 CYP2D7A0A087X1C5 515 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 SH2B2O14492 632 aaPredicted RBP19.72■□□□□ 0.75
VEGFA-205ENST00000372067 TPTE2Q6XPS3 522 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 hCG_1642624A0A1W2PR95 340 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 MYSM1Q5VVJ2 828 aa19.72■□□□□ 0.75
VEGFA-205ENST00000372067 RPS8P62241 208 aaKnown RBP19.71■□□□□ 0.75
VEGFA-205ENST00000372067 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 FGFR2P21802 821 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 EPB41L4AQ9HCS5 686 aaPredicted RBP19.71■□□□□ 0.75
VEGFA-205ENST00000372067 GNAT2P19087 354 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 FAM160A1Q05DH4 1040 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 TIGD1Q96MW7 591 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 TRERF1Q96PN7 1200 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 GOLPH3LQ9H4A5 285 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 KCNJ14Q9UNX9 436 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 HPS5Q9UPZ3 1129 aa19.71■□□□□ 0.75
VEGFA-205ENST00000372067 ZMYM6O95789 1325 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 CDC27P30260 824 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 FILIP1Q7Z7B0 1213 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
VEGFA-205ENST00000372067 CEP57L1Q8IYX8 460 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 KCNG4Q8TDN1 519 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 CRYBG1Q9Y4K1 1723 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 GSG1L2A8MUP6 293 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 STX1AQ16623 288 aa19.7■□□□□ 0.74
VEGFA-205ENST00000372067 CTAGE5O15320 804 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 AATFQ9NY61 560 aaKnown RBP eCLIP19.69■□□□□ 0.742e-17■■□□□ 11.9
VEGFA-205ENST00000372067 DISP2A7MBM2 1401 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 ABCC12Q96J65 1359 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 PPARAQ07869 468 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 CNPY4Q8N129 248 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 JMYQ8N9B5 988 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 AGXT2Q9BYV1 514 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 ANO10Q9NW15 660 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 PTGS1P23219 599 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 BRAPQ7Z569 592 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 ESR2Q92731 530 aa19.69■□□□□ 0.74
VEGFA-205ENST00000372067 CCDC186Q7Z3E2 898 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 NYXQ9GZU5 481 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 NAT10Q9H0A0 1025 aaKnown RBP19.68■□□□□ 0.74
VEGFA-205ENST00000372067 UBE2Q2LH0YL09 131 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 SLC3A2P08195 630 aaKnown RBP19.68■□□□□ 0.74
VEGFA-205ENST00000372067 ZNF512BQ96KM6 892 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-205ENST00000372067 MINPP1Q9UNW1 487 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 SMC2O95347 1197 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 HIBADHP31937 336 aaKnown RBP19.68■□□□□ 0.74
VEGFA-205ENST00000372067 SPECC1Q5M775 1068 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 NKX2-3Q8TAU0 364 aa19.68■□□□□ 0.74
VEGFA-205ENST00000372067 KIF28PB7ZC32 967 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 NDUFA8P51970 172 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 AOPEPQ8N6M6 819 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
VEGFA-205ENST00000372067 NBPF3Q9H094 633 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 CLIP2Q9UDT6 1046 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 IQCA1Q86XH1 822 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 WASF1Q92558 559 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 OGFRQ9NZT2 677 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 TPM4P67936 248 aa19.67■□□□□ 0.74
VEGFA-205ENST00000372067 KIF23Q02241 960 aaPredicted RBP19.67■□□□□ 0.74
VEGFA-205ENST00000372067 NOLC1Q14978 699 aaKnown RBP eCLIP19.67■□□□□ 0.745e-26■□□□□ 10.1
VEGFA-205ENST00000372067 USP5P45974 858 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 GABPB1Q06547 395 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-205ENST00000372067 TCRBV5S4A2TA0A5A2 114 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 ATL3Q6DD88 541 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 CLEC4GQ6UXB4 293 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 PDILTQ8N807 584 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 ROBO1Q9Y6N7 1651 aa19.66■□□□□ 0.74
VEGFA-205ENST00000372067 CCDC196A0A1B0GTZ2 297 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 TERF2Q15554 542 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
VEGFA-205ENST00000372067 C11orf57Q6ZUT1 292 aaPredicted RBP19.65■□□□□ 0.74
VEGFA-205ENST00000372067 LINC00301Q8NCQ3 95 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 FUCA2Q9BTY2 467 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 LY9Q9HBG7 655 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 USP17L12C9JPN9 530 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 USP17L21D6R901 530 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 KLRK1P26718 216 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 SYKP43405 635 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 RTEL1Q9NZ71 1219 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 TRAPPC3LQ5T215 181 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 CATIPQ7Z7H3 387 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 GLI3P10071 1580 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
VEGFA-205ENST00000372067 XBP1P17861 261 aa19.64■□□□□ 0.74
VEGFA-205ENST00000372067 BSDC1Q9NW68 430 aaPredicted RBP19.64■□□□□ 0.74
VEGFA-205ENST00000372067 ERICH4A6NGS2 130 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 BTBD18B2RXH4 712 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 AP5Z1O43299 807 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 ADALQ6DHV7 355 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 ZNF654Q8IZM8 581 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 ZNF592Q92610 1267 aa19.64■□□□□ 0.73
VEGFA-205ENST00000372067 CLIC6Q96NY7 704 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms