RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 TAF3Q5VWG9 929 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 TBC1D10CQ8IV04 446 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 COL1A1P02452 1464 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 JAK2O60674 1132 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 BBOX1O75936 387 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 DDR1Q08345 913 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 CNNM2Q9H8M5 875 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 PRKAB2O43741 272 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 DHX16O60231 1041 aaKnown RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 CEBPZQ03701 1054 aaKnown RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 TPD52L1Q16890 204 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 SPTY2D1Q68D10 685 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 NBPF3Q9H094 633 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 TCHHQ07283 1943 aa11.6□□□□□ -0.55
PRPF38B-203ENST00000370025 H3BQV1 296 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ANTXR2P58335 489 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 CCDC112Q8NEF3 446 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 DDX11Q96FC9 970 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 KRT23Q9C075 422 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 KLF18A0A0U1RQI7 1052 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 MFSD6Q6ZSS7 791 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ZNF804AQ7Z570 1209 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 NSUN7Q8NE18 718 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 B4E1Z4 1266 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 AKNAD1Q5T1N1 836 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 CRAMP1Q96RY5 1269 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 FEZ1Q99689 392 aa11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-203ENST00000370025 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 HOXA10P31260 410 aaPredicted RBP11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 CDC37L1Q7L3B6 337 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 ADGRA1Q86SQ6 560 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 WDR66Q8TBY9 1149 aa11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 TRMT1Q9NXH9 659 aaKnown RBP11.58□□□□□ -0.55
PRPF38B-203ENST00000370025 GOLGA8BA8MQT2 603 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 TERF2Q15554 542 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 MECOMQ03112 1051 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 C15orf52Q6ZUT6 534 aaKnown RBP11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 LUZP1Q86V48 1076 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 CKAP2LQ8IYA6 745 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 SPTLC3Q9NUV7 552 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 GGA1Q9UJY5 639 aa11.58□□□□□ -0.56
PRPF38B-203ENST00000370025 IRS2Q9Y4H2 1338 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 GPSM2P81274 684 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CYB5R4Q7L1T6 521 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 NEDD4P46934 1319 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CPLX1O14810 134 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 POLR3GO15318 223 aaPredicted RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 UFL1O94874 794 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CTDNEP1O95476 244 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CAPN2P17655 700 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 KRT85P78386 507 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 DZIP1Q86YF9 867 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 CHD4Q14839 1912 aa11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 DYNLL1P63167 89 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-203ENST00000370025 MINDY4BA8MYZ0 360 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 PPARAQ07869 468 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 SART3Q15020 963 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 TRIM5Q9C035 493 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 PRDX5P30044 214 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 CCDC88AQ3V6T2 1871 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 KRT222Q8N1A0 295 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 CRNKL1Q9BZJ0 848 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 ZSCAN16Q9H4T2 348 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms