RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 ICE2Q659A1 982 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 CPS1P31327 1500 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 EBAG9O00559 213 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 RNF113AO15541 343 aaKnown RBP11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 FGAP02671 866 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 SHTN1A0MZ66 631 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 YEATS4O95619 227 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 TUBB4AP04350 444 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 FDPSP14324 419 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 PNKPQ96T60 521 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 CCDC151A5D8V7 595 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 RNF40O75150 1001 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 POSTNQ15063 836 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 CCDC181Q5TID7 509 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 BRAPQ7Z569 592 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 ZRANB2O95218 330 aaKnown RBP eCLIP11.83□□□□□ -0.521e-10■■■■□ 21
PRPF38B-201ENST00000370021 KRT9P35527 623 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 KCTD16Q68DU8 428 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 NAPGQ99747 312 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 IQSEC3Q9UPP2 1182 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-201ENST00000370021 NALCNQ8IZF0 1738 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CDKL5O76039 1030 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 BRD3Q15059 726 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CDC23Q9UJX2 597 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 M0R2C6 588 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 STX10O60499 249 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 PPM1EQ8WY54 764 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 AIDAQ96BJ3 306 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 ERBB3P21860 1342 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 GPTP24298 496 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CDC27P30260 824 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 NCAPHQ15003 741 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 BCAS4Q8TDM0 211 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
PRPF38B-201ENST00000370021 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 AGLP35573 1532 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 ERLIN2O94905 339 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 TDO2P48775 406 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 UBXN1Q04323 297 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 SHC4Q6S5L8 630 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 CUTAO60888 179 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 NR5A1Q13285 461 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 STIM1Q13586 685 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 NOA1Q8NC60 698 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 KAZALD1Q96I82 304 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 ATP2B2Q01814 1243 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 ZNF174Q15697 407 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 USP49Q70CQ1 688 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 SND1Q7KZF4 910 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 ZNF274Q96GC6 653 aaPredicted RBP11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
PRPF38B-201ENST00000370021 A2ML1A8K2U0 1454 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms