RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
VANGL1-203ENST00000369509 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
VANGL1-203ENST00000369509 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
VANGL1-203ENST00000369509 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
VANGL1-203ENST00000369509 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 B4E1Z4 1266 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 G3V3G9 751 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 BAG3O95817 575 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 RHBDL3P58872 404 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 TRDNQ13061 729 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 PKP1Q13835 747 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 GPHNQ9NQX3 736 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-203ENST00000369509 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 PPIP5K2O43314 1243 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 FGRP09769 529 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 EVX2Q03828 476 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 CNNM2Q9H8M5 875 aa13.08□□□□□ -0.32
VANGL1-203ENST00000369509 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-203ENST00000369509 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-203ENST00000369509 MYH8P13535 1937 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L12C9JPN9 530 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L21D6R901 530 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
VANGL1-203ENST00000369509 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
VANGL1-203ENST00000369509 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 PFKFB2O60825 505 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 FGD1P98174 961 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 KRT23Q9C075 422 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 RNF41Q9H4P4 317 aaPredicted RBP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 SIPA1L1O43166 1804 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 KDM4AO75164 1064 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 SCRN1Q12765 414 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 STK3Q13188 491 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
VANGL1-203ENST00000369509 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
VANGL1-203ENST00000369509 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
VANGL1-203ENST00000369509 USP17L8P0C7I0 530 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 CYP2D6P10635 497 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
VANGL1-203ENST00000369509 PLCG2P16885 1265 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
VANGL1-203ENST00000369509 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 TMEM87BQ96K49 555 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
VANGL1-203ENST00000369509 ANGEL1Q9UNK9 670 aaKnown RBP13.05□□□□□ -0.32
VANGL1-203ENST00000369509 FLT1P17948 1338 aa13.05□□□□□ -0.32
VANGL1-203ENST00000369509 USP5P45974 858 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 TGFBRAP1Q8WUH2 860 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 LY9Q9HBG7 655 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 SMC3Q9UQE7 1217 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 TCHHQ07283 1943 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 ORC4O43929 436 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 DTNBO60941 627 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
VANGL1-203ENST00000369509 BRD1O95696 1058 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 GJB2P29033 226 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 SCNN1DP51172 638 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 GRPEL1Q9HAV7 217 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
VANGL1-203ENST00000369509 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
VANGL1-203ENST00000369509 APOBEC3HQ6NTF7 200 aaKnown RBP13.03□□□□□ -0.32
VANGL1-203ENST00000369509 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 MAPKAPK5Q8IW41 473 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-203ENST00000369509 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
VANGL1-203ENST00000369509 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 NFKBIEO00221 500 aa13.03□□□□□ -0.32
VANGL1-203ENST00000369509 CTDNEP1O95476 244 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms