RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
GFRA1-203ENST00000369236 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 RABEP2Q9H5N1 569 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
GFRA1-203ENST00000369236 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 TYW1Q9NV66 732 aaKnown RBP13.36□□□□□ -0.27
GFRA1-203ENST00000369236 ZBTB43O43298 467 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 GNAQP50148 359 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 CTAGE3PQ8IX95 158 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 BAG5Q9UL15 447 aa13.36□□□□□ -0.27
GFRA1-203ENST00000369236 EPB41P11171 864 aaKnown RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 NLRP6P59044 892 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 CCDC197Q8NCU1 140 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 CARD6Q9BX69 1037 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 PAIP2BQ9ULR5 123 aaKnown RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 TRIM75PA6NK02 468 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 NBPF9Q3BBW0 867 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 MCTP2Q6DN12 878 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 NEK2P51955 445 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 RTN1Q16799 776 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
GFRA1-203ENST00000369236 TTC4O95801 387 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 WTAPQ15007 396 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 IQUBQ8NA54 791 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 TMEM232C9JQI7 657 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 KRT2P35908 639 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 ASIC3Q9UHC3 531 aa13.35□□□□□ -0.27
GFRA1-203ENST00000369236 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
GFRA1-203ENST00000369236 TBC1D8O95759 1140 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 ATF3P18847 181 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 PTPN23Q9H3S7 1636 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
GFRA1-203ENST00000369236 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 ICE2Q659A1 982 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
GFRA1-203ENST00000369236 RPS6KA2Q15349 733 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 CFAP61Q8NHU2 1237 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
GFRA1-203ENST00000369236 GRK7Q8WTQ7 553 aa13.33□□□□□ -0.27
GFRA1-203ENST00000369236 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
GFRA1-203ENST00000369236 CCDC51Q96ER9 411 aa13.33□□□□□ -0.28
GFRA1-203ENST00000369236 RUNDC3BQ96NL0 473 aa13.33□□□□□ -0.28
GFRA1-203ENST00000369236 HAUS7Q99871 368 aa13.33□□□□□ -0.28
GFRA1-203ENST00000369236 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
GFRA1-203ENST00000369236 IRX1P78414 480 aaPredicted RBP13.33□□□□□ -0.28
GFRA1-203ENST00000369236 MMS22LQ6ZRQ5 1243 aa13.33□□□□□ -0.28
GFRA1-203ENST00000369236 RPSAP08865 295 aaKnown RBP13.33□□□□□ -0.28
GFRA1-203ENST00000369236 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
GFRA1-203ENST00000369236 A0A1B0GW55 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L2P0CJ85 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L3P0CJ86 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L4P0CJ87 422 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L5P0CJ88 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L6P0CJ89 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4L7P0CJ90 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 LMNB1P20700 586 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 DUX4Q9UBX2 424 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 MAGEA9P43362 315 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 EXOC4Q96A65 974 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 POLE2P56282 527 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 MAP7D3Q8IWC1 876 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ANKFY1Q9P2R3 1169 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 STX10O60499 249 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 BAG3O95817 575 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ASIC2Q16515 512 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CCDC169A6NNP5 214 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CALM1P0DP23 149 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CALM2P0DP24 149 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CALM3P0DP25 149 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ATP6V1E1P36543 226 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
GFRA1-203ENST00000369236 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
GFRA1-203ENST00000369236 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms