RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
SCNM1-202ENST00000368905 STK32AQ8WU08 396 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
SCNM1-202ENST00000368905 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 FAM208AQ9UK61 1670 aaKnown RBP11.53□□□□□ -0.56
SCNM1-202ENST00000368905 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 SEC13P55735 322 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 PPP2R5BQ15173 497 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 AKAP4Q5JQC9 854 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 DAAM2Q86T65 1068 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 GPR101Q96P66 508 aaPredicted RBP11.53□□□□□ -0.56
SCNM1-202ENST00000368905 NCAPGQ9BPX3 1015 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.56
SCNM1-202ENST00000368905 ECEL1O95672 775 aa11.52□□□□□ -0.56
SCNM1-202ENST00000368905 ATF3P18847 181 aa11.52□□□□□ -0.56
SCNM1-202ENST00000368905 SH3BGRP55822 239 aaPredicted RBP11.52□□□□□ -0.56
SCNM1-202ENST00000368905 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.52□□□□□ -0.565e-6■■□□□ 11.5
SCNM1-202ENST00000368905 ZNF700Q9H0M5 742 aa11.52□□□□□ -0.56
SCNM1-202ENST00000368905 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 SLIT3O75094 1523 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 FRAT2O75474 233 aaPredicted RBP11.52□□□□□ -0.57
SCNM1-202ENST00000368905 TCEA3O75764 348 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 MAGEA8P43361 318 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 INHBEP58166 350 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 ARID5AQ03989 594 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 C1orf141Q5JVX7 400 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
SCNM1-202ENST00000368905 G2E3Q7L622 706 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 TAX1BP1Q86VP1 789 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 JMYQ8N9B5 988 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
SCNM1-202ENST00000368905 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 PRM3Q9NNZ6 103 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 TRMT1Q9NXH9 659 aaKnown RBP11.52□□□□□ -0.57
SCNM1-202ENST00000368905 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
SCNM1-202ENST00000368905 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
SCNM1-202ENST00000368905 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 CAPN15O75808 1086 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 GCP02774 474 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 SNX16P57768 344 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 TEFQ10587 303 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 NFE2Q16621 373 aaPredicted RBP11.51□□□□□ -0.57
SCNM1-202ENST00000368905 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 FLCNQ8NFG4 579 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 UHMK1Q8TAS1 419 aaKnown RBP11.51□□□□□ -0.57
SCNM1-202ENST00000368905 SPAG5Q96R06 1193 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 MKS1Q9NXB0 559 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 TAGLN3Q9UI15 199 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 MKL2Q9ULH7 1088 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 ITM2BQ9Y287 266 aa11.51□□□□□ -0.57
SCNM1-202ENST00000368905 F6X3S4 739 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 FANCCQ00597 558 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 HYIQ5T013 277 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 ERAP2Q6P179 960 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-202ENST00000368905 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 SKA1Q96BD8 255 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
SCNM1-202ENST00000368905 MST1RQ04912 1400 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 LMO7Q8WWI1 1683 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 NDUFV2P19404 249 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 FECHP22830 423 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 MECOMQ03112 1051 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 TMEM259Q4ZIN3 620 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 SWT1Q5T5J6 900 aaKnown RBP11.5□□□□□ -0.57
SCNM1-202ENST00000368905 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
SCNM1-202ENST00000368905 MED1Q15648 1581 aaPredicted RBP11.49□□□□□ -0.57
SCNM1-202ENST00000368905 REC8O95072 547 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 IL4RP24394 825 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 RBM5P52756 815 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCNM1-202ENST00000368905 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 SLMAPQ14BN4 828 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 LRRC41Q15345 812 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 AGAP9Q5VTM2 703 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 ABCG4Q9H172 646 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 LUZP4Q9P127 313 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
SCNM1-202ENST00000368905 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 GSPT1P15170 499 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 RASA1P20936 1047 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 ZNF449Q6P9G9 518 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms