RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 PDE4BQ07343 736 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 DIXDC1Q155Q3 683 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 CTR9Q6PD62 1173 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 TEKT1Q969V4 418 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 TTF2Q9UNY4 1162 aaKnown RBP20.89■□□□□ 0.93
PSMD4-201ENST00000368881 NEDD4P46934 1319 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 ROBO3Q96MS0 1386 aa20.89■□□□□ 0.93
PSMD4-201ENST00000368881 B4E1Z4 1266 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 ORC4O43929 436 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 LARGE1O95461 756 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 LIFRP42702 1097 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 GRIK5Q16478 980 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 TEX11Q8IYF3 940 aa20.88■□□□□ 0.93
PSMD4-201ENST00000368881 SH3RF3Q8TEJ3 882 aaPredicted RBP20.88■□□□□ 0.93
PSMD4-201ENST00000368881 ZNF646O15015 1829 aaPredicted RBP20.88■□□□□ 0.93
PSMD4-201ENST00000368881 WDR33Q9C0J8 1336 aaKnown RBP20.88■□□□□ 0.93
PSMD4-201ENST00000368881 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 USP17L21D6R901 530 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 RCAN1P53805 252 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 ANTXR2P58335 489 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 HMGN5P82970 282 aaKnown RBP20.87■□□□□ 0.93
PSMD4-201ENST00000368881 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 DACT2Q5SW24 774 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 CLEC17AQ6ZS10 378 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 MKRN1Q9UHC7 482 aaKnown RBP20.87■□□□□ 0.93
PSMD4-201ENST00000368881 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 DAGLAQ9Y4D2 1042 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 CDK5RAP2Q96SN8 1893 aa20.87■□□□□ 0.93
PSMD4-201ENST00000368881 SH2B2O14492 632 aaPredicted RBP20.86■□□□□ 0.93
PSMD4-201ENST00000368881 SGMS1Q86VZ5 419 aa20.86■□□□□ 0.93
PSMD4-201ENST00000368881 CERS5Q8N5B7 392 aa20.86■□□□□ 0.93
PSMD4-201ENST00000368881 TOMM22Q9NS69 142 aa20.86■□□□□ 0.93
PSMD4-201ENST00000368881 DDX60LQ5H9U9 1706 aaKnown RBP20.86■□□□□ 0.93
PSMD4-201ENST00000368881 FER1L6Q2WGJ9 1857 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 DDX11L8A8MPP1 907 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 KDM4AO75164 1064 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 MMP14P50281 582 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 APOBRQ0VD83 1088 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 CCDC178Q5BJE1 867 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 SYNE3Q6ZMZ3 975 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 IQCA1Q86XH1 822 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 LARGE2Q8N3Y3 721 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 LARP6Q9BRS8 491 aaKnown RBP20.85■□□□□ 0.93
PSMD4-201ENST00000368881 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 LRRC2Q9BYS8 371 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 ZSWIM5Q9P217 1185 aa20.85■□□□□ 0.93
PSMD4-201ENST00000368881 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 GOLGA6L22H0YM25 854 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 GJB2P29033 226 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 PDIA3P30101 505 aaKnown RBP20.84■□□□□ 0.93
PSMD4-201ENST00000368881 PTGER2P43116 358 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 RHBDL3P58872 404 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 COL9A3Q14050 684 aaPredicted RBP20.84■□□□□ 0.93
PSMD4-201ENST00000368881 TMEM67Q5HYA8 995 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 CYB5R4Q7L1T6 521 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 TGFBRAP1Q8WUH2 860 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 TNPO1Q92973 898 aaKnown RBP20.84■□□□□ 0.93
PSMD4-201ENST00000368881 ZDHHC15Q96MV8 337 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 ANP32EQ9BTT0 268 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 SERPINA10Q9UK55 444 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
PSMD4-201ENST00000368881 SCN9AQ15858 1988 aa20.84■□□□□ 0.93
PSMD4-201ENST00000368881 KLF18A0A0U1RQI7 1052 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 IFIT3O14879 490 aaKnown RBP20.83■□□□□ 0.93
PSMD4-201ENST00000368881 BRD1O95696 1058 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 IARSP41252 1262 aaKnown RBP20.83■□□□□ 0.93
PSMD4-201ENST00000368881 RRP12Q5JTH9 1297 aaKnown RBP20.83■□□□□ 0.93
PSMD4-201ENST00000368881 CPLX2Q6PUV4 134 aaKnown RBP20.83■□□□□ 0.93
PSMD4-201ENST00000368881 CHST3Q7LGC8 479 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 NECAB1Q8N987 351 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 IGDCC4Q8TDY8 1250 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 TAOK3Q9H2K8 898 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 SPON1Q9HCB6 807 aa20.83■□□□□ 0.93
PSMD4-201ENST00000368881 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.92
PSMD4-201ENST00000368881 NID2Q14112 1375 aa20.83■□□□□ 0.92
PSMD4-201ENST00000368881 CCDC69A6NI79 296 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 CDKL5O76039 1030 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
PSMD4-201ENST00000368881 CRKP46108 304 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 SCRN1Q12765 414 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 STK3Q13188 491 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 WTAPQ15007 396 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 PPP2R5BQ15173 497 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 RGS22Q8NE09 1264 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 HDAC9Q9UKV0 1011 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 ATP6V1DQ9Y5K8 247 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 ECM29Q5VYK3 1845 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 MYH1P12882 1939 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 FLT1P17948 1338 aa20.82■□□□□ 0.92
PSMD4-201ENST00000368881 GOLGA8BA8MQT2 603 aa20.81■□□□□ 0.92
PSMD4-201ENST00000368881 NPM3O75607 178 aaKnown RBP20.81■□□□□ 0.92
PSMD4-201ENST00000368881 NFXL1Q6ZNB6 911 aa20.81■□□□□ 0.92
PSMD4-201ENST00000368881 TTC6Q86TZ1 520 aa20.81■□□□□ 0.92
PSMD4-201ENST00000368881 SMARCC2Q8TAQ2 1214 aa20.81■□□□□ 0.92
PSMD4-201ENST00000368881 LY9Q9HBG7 655 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms