RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 TGFBRAP1Q8WUH2 860 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 KRT23Q9C075 422 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 MCM9Q9NXL9 1143 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 ARPP21Q9UBL0 812 aaPredicted RBP22.94■■□□□ 1.26
CHTOP-204ENST00000368694 ANAPC4Q9UJX5 808 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.94■■□□□ 1.26
CHTOP-204ENST00000368694 FKBP1AP62942 108 aaKnown RBP22.94■■□□□ 1.26
CHTOP-204ENST00000368694 KIAA0825Q8IV33 1275 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 TEX11Q8IYF3 940 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 YDJCA8MPS7 323 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 ANTXR2P58335 489 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 APOBRQ0VD83 1088 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 AGXT2Q9BYV1 514 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 WDR19Q8NEZ3 1342 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 TEKT1Q969V4 418 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 NAP1L2Q9ULW6 460 aaPredicted RBP22.93■■□□□ 1.26
CHTOP-204ENST00000368694 TACC3Q9Y6A5 838 aa22.93■■□□□ 1.26
CHTOP-204ENST00000368694 KDM4AO75164 1064 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 SLC4A8Q2Y0W8 1093 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 CYB5R4Q7L1T6 521 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 VPS33BQ9H267 617 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 TAOK3Q9H2K8 898 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 FOCADQ5VW36 1801 aa22.92■■□□□ 1.26
CHTOP-204ENST00000368694 COL4A5P29400 1685 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 SMIM22K7EJ46 135 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 MAPKAPK5Q8IW41 473 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 AMOTL1Q8IY63 956 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 NLGN2Q8NFZ4 835 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 NKX2-3Q8TAU0 364 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 USP17L8P0C7I0 530 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
CHTOP-204ENST00000368694 RHBDL3P58872 404 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 FBXL16Q8N461 479 aa22.91■■□□□ 1.26
CHTOP-204ENST00000368694 GPHNQ9NQX3 736 aaPredicted RBP22.91■■□□□ 1.26
CHTOP-204ENST00000368694 SBK1Q52WX2 424 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 HHIPL2Q6UWX4 724 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 NIM1KQ8IY84 436 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 ZSWIM5Q9P217 1185 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 MKRN1Q9UHC7 482 aaKnown RBP22.9■■□□□ 1.26
CHTOP-204ENST00000368694 SMC3Q9UQE7 1217 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 MYH1P12882 1939 aa22.9■■□□□ 1.26
CHTOP-204ENST00000368694 SLC3A2P08195 630 aaKnown RBP22.89■■□□□ 1.26
CHTOP-204ENST00000368694 CYP2D6P10635 497 aa22.89■■□□□ 1.26
CHTOP-204ENST00000368694 CRKP46108 304 aa22.89■■□□□ 1.26
CHTOP-204ENST00000368694 ST3GAL1Q11201 340 aa22.89■■□□□ 1.26
CHTOP-204ENST00000368694 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.25
CHTOP-204ENST00000368694 EVX2Q03828 476 aa22.89■■□□□ 1.25
CHTOP-204ENST00000368694 ARFGEF1Q9Y6D6 1849 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 RAD17O75943 681 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 RBM5P52756 815 aaKnown RBP eCLIP22.88■■□□□ 1.25
CHTOP-204ENST00000368694 ILDR2Q71H61 639 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 GTF3C6Q969F1 213 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 TMEM87BQ96K49 555 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 SAP30BPQ9UHR5 308 aaKnown RBP22.88■■□□□ 1.25
CHTOP-204ENST00000368694 ANGEL1Q9UNK9 670 aaKnown RBP22.88■■□□□ 1.25
CHTOP-204ENST00000368694 FLT1P17948 1338 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 DDX60LQ5H9U9 1706 aaKnown RBP22.88■■□□□ 1.25
CHTOP-204ENST00000368694 PCP11498 1178 aaKnown RBP22.88■■□□□ 1.25
CHTOP-204ENST00000368694 NUCB2P80303 420 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 ESR2Q92731 530 aa22.88■■□□□ 1.25
CHTOP-204ENST00000368694 PRDM1O75626 825 aa22.87■■□□□ 1.25
CHTOP-204ENST00000368694 POLR3DP05423 398 aaPredicted RBP22.87■■□□□ 1.25
CHTOP-204ENST00000368694 KLF18A0A0U1RQI7 1052 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 NFKBIEO00221 500 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 SART3Q15020 963 aaKnown RBP22.86■■□□□ 1.25
CHTOP-204ENST00000368694 RAB3GAP1Q15042 981 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 TMEM67Q5HYA8 995 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 C12orf60Q5U649 245 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 ZNF274Q96GC6 653 aaPredicted RBP22.86■■□□□ 1.25
CHTOP-204ENST00000368694 USP40Q9NVE5 1235 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 ZNRF3Q9ULT6 936 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 PSMD14O00487 310 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 SH2B2O14492 632 aaPredicted RBP22.86■■□□□ 1.25
CHTOP-204ENST00000368694 IFIT3O14879 490 aaKnown RBP22.86■■□□□ 1.25
CHTOP-204ENST00000368694 RANBP6O60518 1105 aaKnown RBP22.86■■□□□ 1.25
CHTOP-204ENST00000368694 DTNBO60941 627 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 PDE4BQ07343 736 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 PICALMQ13492 652 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 PKP1Q13835 747 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 ZDHHC15Q96MV8 337 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 ZKSCAN3Q9BRR0 538 aa22.86■■□□□ 1.25
CHTOP-204ENST00000368694 MYO3BQ8WXR4 1341 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 PFKFB2O60825 505 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 GJB2P29033 226 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 HDLBPQ00341 1268 aaKnown RBP22.85■■□□□ 1.25
CHTOP-204ENST00000368694 SCRN1Q12765 414 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 APOBEC3HQ6NTF7 200 aaKnown RBP22.85■■□□□ 1.25
CHTOP-204ENST00000368694 RSBN1LQ6PCB5 846 aaPredicted RBP22.85■■□□□ 1.25
CHTOP-204ENST00000368694 JDP2Q8WYK2 163 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 ERICH2A1L162 156 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 PDIA3P30101 505 aaKnown RBP22.85■■□□□ 1.25
CHTOP-204ENST00000368694 CCT2P78371 535 aaKnown RBP22.85■■□□□ 1.25
CHTOP-204ENST00000368694 NFXL1Q6ZNB6 911 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 UBAC1Q9BSL1 405 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 MRIQ9BWK5 157 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 SERPINA10Q9UK55 444 aa22.85■■□□□ 1.25
CHTOP-204ENST00000368694 GOLGA8BA8MQT2 603 aa22.84■■□□□ 1.25
CHTOP-204ENST00000368694 EVCP57679 992 aa22.84■■□□□ 1.25
CHTOP-204ENST00000368694 CDC42EP5Q6NZY7 148 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms