RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 USP28Q96RU2 1077 aa20.36■□□□□ 0.85
LMNA-205ENST00000368299 SENP2Q9HC62 589 aa20.36■□□□□ 0.85
LMNA-205ENST00000368299 ZNF384Q8TF68 577 aa20.35■□□□□ 0.85
LMNA-205ENST00000368299 TNMDQ9H2S6 317 aa20.35■□□□□ 0.85
LMNA-205ENST00000368299 STK36Q9NRP7 1315 aa20.35■□□□□ 0.85
LMNA-205ENST00000368299 MINDY4BA8MYZ0 360 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 CDC27P30260 824 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
LMNA-205ENST00000368299 NTRK3Q16288 839 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 CRY2Q49AN0 593 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 CLSTN2Q9H4D0 955 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 RTEL1Q9NZ71 1219 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 CEBPZQ03701 1054 aaKnown RBP20.34■□□□□ 0.85
LMNA-205ENST00000368299 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
LMNA-205ENST00000368299 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 ALG1Q9BT22 464 aa20.34■□□□□ 0.85
LMNA-205ENST00000368299 CRNKL1Q9BZJ0 848 aaKnown RBP20.34■□□□□ 0.85
LMNA-205ENST00000368299 CCDC196A0A1B0GTZ2 297 aa20.33■□□□□ 0.85
LMNA-205ENST00000368299 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.85
LMNA-205ENST00000368299 DYNLL1P63167 89 aaKnown RBP20.33■□□□□ 0.85
LMNA-205ENST00000368299 CHAF1AQ13111 956 aaPredicted RBP20.33■□□□□ 0.85
LMNA-205ENST00000368299 RBM43Q6ZSC3 357 aaKnown RBP20.33■□□□□ 0.85
LMNA-205ENST00000368299 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.85
LMNA-205ENST00000368299 WASF1Q92558 559 aa20.33■□□□□ 0.85
LMNA-205ENST00000368299 MAST2Q6P0Q8 1798 aa20.33■□□□□ 0.85
LMNA-205ENST00000368299 SERPINB2P05120 415 aa20.33■□□□□ 0.84
LMNA-205ENST00000368299 RXRAP19793 462 aa20.33■□□□□ 0.84
LMNA-205ENST00000368299 ATP8A2Q9NTI2 1148 aa20.33■□□□□ 0.84
LMNA-205ENST00000368299 FAM217BQ9NTX9 383 aaPredicted RBP20.33■□□□□ 0.84
LMNA-205ENST00000368299 FGRP09769 529 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
LMNA-205ENST00000368299 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
LMNA-205ENST00000368299 POLR3EQ9NVU0 708 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 NR1I2O75469 434 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 TRIM37O94972 964 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 YEATS4O95619 227 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 IFNAR1P17181 557 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 PRDX5P30044 214 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
LMNA-205ENST00000368299 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
LMNA-205ENST00000368299 TRIM29Q14134 588 aa20.31■□□□□ 0.84
LMNA-205ENST00000368299 MYSM1Q5VVJ2 828 aa20.31■□□□□ 0.84
LMNA-205ENST00000368299 KCNG4Q8TDN1 519 aa20.31■□□□□ 0.84
LMNA-205ENST00000368299 FMNL1O95466 1100 aaPredicted RBP20.3■□□□□ 0.84
LMNA-205ENST00000368299 RTN1Q16799 776 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
LMNA-205ENST00000368299 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 TDRD7Q8NHU6 1098 aaKnown RBP20.3■□□□□ 0.84
LMNA-205ENST00000368299 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
LMNA-205ENST00000368299 NOL7Q9UMY1 257 aaKnown RBP20.3■□□□□ 0.84
LMNA-205ENST00000368299 ME1P48163 572 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 CAMK4Q16566 473 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 CTR9Q6PD62 1173 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 CCDC73Q6ZRK6 1079 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 CCAR1Q8IX12 1150 aaKnown RBP20.3■□□□□ 0.84
LMNA-205ENST00000368299 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 PHKBQ93100 1093 aa20.3■□□□□ 0.84
LMNA-205ENST00000368299 CTAGE5O15320 804 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 BBOX1O75936 387 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 KRT40Q6A162 431 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 LINC00301Q8NCQ3 95 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 ZKSCAN3Q9BRR0 538 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 AATFQ9NY61 560 aaKnown RBP eCLIP20.29■□□□□ 0.84
LMNA-205ENST00000368299 ARPP21Q9UBL0 812 aaPredicted RBP20.29■□□□□ 0.84
LMNA-205ENST00000368299 CCDC88AQ3V6T2 1871 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 TNKSO95271 1327 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 RANBP6O60518 1105 aaKnown RBP20.29■□□□□ 0.84
LMNA-205ENST00000368299 POLR3DP05423 398 aaPredicted RBP20.29■□□□□ 0.84
LMNA-205ENST00000368299 SLC3A2P08195 630 aaKnown RBP20.29■□□□□ 0.84
LMNA-205ENST00000368299 ADALQ6DHV7 355 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 ZNF654Q8IZM8 581 aa20.29■□□□□ 0.84
LMNA-205ENST00000368299 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
LMNA-205ENST00000368299 A0A1W2PQ27 194 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 A0A1W2PQ64 194 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 A0A1W2PQD8 194 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
LMNA-205ENST00000368299 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 NT5C2P49902 561 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 GSTO1P78417 241 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 STK38Q15208 465 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 SEC23AQ15436 765 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
LMNA-205ENST00000368299 BRWD3Q6RI45 1802 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 USP17L12C9JPN9 530 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 USP17L21D6R901 530 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
LMNA-205ENST00000368299 TYRO3Q06418 890 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 SBK1Q52WX2 424 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 STK11IPQ8N1F8 1099 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 ZSCAN10Q96SZ4 725 aaPredicted RBP20.28■□□□□ 0.84
LMNA-205ENST00000368299 SLC26A6Q9BXS9 759 aa20.28■□□□□ 0.84
LMNA-205ENST00000368299 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.84
LMNA-205ENST00000368299 ORC4O43929 436 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms