RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 SLC4A4Q9Y6R1 1079 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 UBE3CQ15386 1083 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 TRMT44Q8IYL2 757 aaKnown RBP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 TRIM22Q8IYM9 498 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 GRAMD1CQ8IYS0 662 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 TMEM87BQ96K49 555 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 LY9Q9HBG7 655 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 LRP2BPQ9P2M1 347 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 ABCF2Q9UG63 623 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 hCG_1642624A0A1W2PR95 340 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 KMT5BQ4FZB7 885 aa14.19□□□□□ -0.14
PTPN7-202ENST00000367279 DIS3L2Q8IYB7 885 aaKnown RBP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 ZNF397Q8NF99 534 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-202ENST00000367279 CBFA2T2O43439 604 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 PDE8AO60658 829 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 URI1O94763 535 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 SLC5A1P13866 664 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 IGDCC4Q8TDY8 1250 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 BPIFA3Q9BQP9 254 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 SEC31BQ9NQW1 1179 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 ADAMTSL3P82987 1691 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 KIF2AO00139 706 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 POLR2DO15514 142 aaKnown RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 GRIN1Q05586 938 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 WTAPQ15007 396 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 RTN1Q16799 776 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 FBXO38Q6PIJ6 1188 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 KRI1Q8N9T8 703 aaKnown RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 LRRN4CLQ8ND94 238 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 EPB41L4AQ9HCS5 686 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-202ENST00000367279 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 GLI3P10071 1580 aa14.18□□□□□ -0.14
PTPN7-202ENST00000367279 NR5A1Q13285 461 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 PTPAQ15257 358 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 SYCP1Q15431 976 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
PTPN7-202ENST00000367279 CUTAO60888 179 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 PPP6R2O75170 966 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 MNS1Q8NEH6 495 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 LPIN2Q92539 896 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-202ENST00000367279 BCAMP50895 628 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 KLHL10Q6JEL2 608 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
PTPN7-202ENST00000367279 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
PTPN7-202ENST00000367279 PDE4BQ07343 736 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 AKNAD1Q5T1N1 836 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 RESP18Q5W5W9 173 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 LCORLQ8N3X6 602 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 HOOK1Q9UJC3 728 aaKnown RBP14.16□□□□□ -0.14
PTPN7-202ENST00000367279 IKBKBO14920 756 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
PTPN7-202ENST00000367279 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 UBAC1Q9BSL1 405 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
PTPN7-202ENST00000367279 ABCC6O95255 1503 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 WDR19Q8NEZ3 1342 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 NTRK3Q16288 839 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 TIGD1Q96MW7 591 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 CABP5Q9NP86 173 aa14.16□□□□□ -0.14
PTPN7-202ENST00000367279 MYO5AQ9Y4I1 1855 aaKnown RBP14.16□□□□□ -0.14
PTPN7-202ENST00000367279 AFMP43652 599 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
PTPN7-202ENST00000367279 SDR42E1Q8WUS8 393 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 WASF1Q92558 559 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
PTPN7-202ENST00000367279 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.14
PTPN7-202ENST00000367279 PCDHB6Q9Y5E3 794 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 SPEF2Q9C093 1822 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 VGLL2Q8N8G2 317 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 KRT23Q9C075 422 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 HPSEQ9Y251 543 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 CDHR2Q9BYE9 1310 aa14.15□□□□□ -0.14
PTPN7-202ENST00000367279 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-202ENST00000367279 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
PTPN7-202ENST00000367279 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms