RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 AKAP17AQ02040 695 aaKnown RBP9.36□□□□□ -0.91
CD46-208ENST00000367042 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 SPECC1LQ69YQ0 1117 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 TOM1L2Q6ZVM7 507 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 CYB5R4Q7L1T6 521 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 STAMQ92783 540 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 RHOXF2Q9BQY4 288 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 KAT6BQ8WYB5 2073 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 C1orf167Q5SNV9 1468 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 ERICH2A1L162 156 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 H7C1W4 665 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 TUBB4AP04350 444 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 POSTNQ15063 836 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 APOA5Q6Q788 366 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
CD46-208ENST00000367042 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 PARD6BQ9BYG5 372 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 HEG1Q9ULI3 1381 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 VWA3AA6NCI4 1184 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 KIF5CO60282 957 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 TDO2P48775 406 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 ZNF569Q5MCW4 686 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 TRIM65Q6PJ69 517 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 REXO1L1PQ8IX06 675 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 AK7Q96M32 723 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 VPS18Q9P253 973 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 CCDC175P0C221 793 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CASP1P29466 404 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 GRIN1Q05586 938 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CCDC191Q8NCU4 936 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CAMTA1Q9Y6Y1 1673 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 ZMYM6O95789 1325 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CUTAO60888 179 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CYP2C19P33261 490 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 CCT6AP40227 531 aaKnown RBP9.35□□□□□ -0.91
CD46-208ENST00000367042 NR5A1Q13285 461 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
CD46-208ENST00000367042 C10orf67Q8IYJ2 551 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 SMYD4Q8IYR2 804 aaPredicted RBP9.35□□□□□ -0.91
CD46-208ENST00000367042 CABP5Q9NP86 173 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 ZNF532Q9HCE3 1301 aa9.35□□□□□ -0.91
CD46-208ENST00000367042 GOLGA6L9A6NEM1 432 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 FMR1Q06787 632 aaKnown RBP eCLIP9.34□□□□□ -0.91
CD46-208ENST00000367042 WWC2Q6AWC2 1192 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 CC2D1AQ6P1N0 951 aaPredicted RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 RASSF8Q8NHQ8 419 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 C19orf44Q9H6X5 657 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 RAI14Q9P0K7 980 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 MAN1B1Q9UKM7 699 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 MINDY4BA8MYZ0 360 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 SASH3O75995 380 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 CASP7P55210 303 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 HSP90B2PQ58FF3 399 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 GPR161Q8N6U8 529 aaKnown RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
CD46-208ENST00000367042 MED1Q15648 1581 aaPredicted RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 XIRP1Q702N8 1843 aaKnown RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 AKR1B15C9JRZ8 316 aaPredicted RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 FANCGO15287 622 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 PPP6R2O75170 966 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 GUCY1A2P33402 732 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 MCAMP43121 646 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 SART3Q15020 963 aaKnown RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 RESP18Q5W5W9 173 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 LEKR1Q6ZMV7 388 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 NOSTRINQ8IVI9 506 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 HSD3B7Q9H2F3 369 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 TUBE1Q9UJT0 475 aa9.34□□□□□ -0.91
CD46-208ENST00000367042 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
CD46-208ENST00000367042 TEX33O43247 280 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 ATF3P18847 181 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 ZSCAN26Q16670 478 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 NKX2-3Q8TAU0 364 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 KDM3BQ7LBC6 1761 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms