RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 YEATS4O95619 227 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 NAT10Q9H0A0 1025 aaKnown RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 PDE8AO60658 829 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 CREBRFQ8IUR6 639 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 MRPS27Q92552 414 aaKnown RBP17.02■□□□□ 0.32
PRKN-204ENST00000366896 BPIFA3Q9BQP9 254 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
PRKN-204ENST00000366896 CSF1RP07333 972 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 WASHC4Q2M389 1173 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 BRAPQ7Z569 592 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 KCNG4Q8TDN1 519 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.31
PRKN-204ENST00000366896 BECN2A8MW95 431 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 DDR1Q08345 913 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
PRKN-204ENST00000366896 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 TPTE2Q6XPS3 522 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
PRKN-204ENST00000366896 CTSWP56202 376 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
PRKN-204ENST00000366896 SLC10A5Q5PT55 438 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 LINC00301Q8NCQ3 95 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 GJB4Q9NTQ9 266 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 ZNF446Q9NWS9 450 aa17.01■□□□□ 0.31
PRKN-204ENST00000366896 A0A1B0GVL5 298 aa17■□□□□ 0.31
PRKN-204ENST00000366896 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
PRKN-204ENST00000366896 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
PRKN-204ENST00000366896 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
PRKN-204ENST00000366896 CLIC4Q9Y696 253 aa17■□□□□ 0.31
PRKN-204ENST00000366896 CASZ1Q86V15 1759 aa17■□□□□ 0.31
PRKN-204ENST00000366896 PRC1O43663 620 aa17■□□□□ 0.31
PRKN-204ENST00000366896 GORABQ5T7V8 394 aa17■□□□□ 0.31
PRKN-204ENST00000366896 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
PRKN-204ENST00000366896 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
PRKN-204ENST00000366896 L2HGDHQ9H9P8 463 aa17■□□□□ 0.31
PRKN-204ENST00000366896 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
PRKN-204ENST00000366896 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 FGAP02671 866 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 SERPINB2P05120 415 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 POLR3DP05423 398 aaPredicted RBP16.99■□□□□ 0.31
PRKN-204ENST00000366896 H2AFXP16104 143 aaPredicted RBP16.99■□□□□ 0.31
PRKN-204ENST00000366896 ZAP70P43403 619 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 NDUFA8P51970 172 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 GSDMDP57764 484 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 ANTXR2P58335 489 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 FBXO18Q8NFZ0 1043 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 APPBP2Q92624 585 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
PRKN-204ENST00000366896 IMPACTQ9P2X3 320 aa16.99■□□□□ 0.31
PRKN-204ENST00000366896 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
PRKN-204ENST00000366896 NRXN2Q9P2S2 1712 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 PRR5LQ6MZQ0 368 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 NEDD4P46934 1319 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 BMS1Q14692 1282 aaKnown RBP16.98■□□□□ 0.31
PRKN-204ENST00000366896 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
PRKN-204ENST00000366896 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 ZNF512BQ96KM6 892 aaPredicted RBP16.97■□□□□ 0.31
PRKN-204ENST00000366896 GREM2Q9H772 168 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 ST7Q9NRC1 585 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
PRKN-204ENST00000366896 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 ZBTB22O15209 634 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 MMP10P09238 476 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 STK38Q15208 465 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 NBPF11Q86T75 865 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 NKX2-3Q8TAU0 364 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 CALCOCO1Q9P1Z2 691 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 ORC3Q9UBD5 711 aaPredicted RBP16.97■□□□□ 0.31
PRKN-204ENST00000366896 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
PRKN-204ENST00000366896 KCNJ6P48051 423 aa16.96■□□□□ 0.31
PRKN-204ENST00000366896 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
PRKN-204ENST00000366896 DPCR1Q3MIW9 517 aa16.96■□□□□ 0.31
PRKN-204ENST00000366896 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
PRKN-204ENST00000366896 SDF4Q9BRK5 362 aa16.96■□□□□ 0.31
PRKN-204ENST00000366896 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
PRKN-204ENST00000366896 NPHP1O15259 732 aa16.96■□□□□ 0.3
PRKN-204ENST00000366896 CCDC93Q567U6 631 aa16.96■□□□□ 0.3
PRKN-204ENST00000366896 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.3
PRKN-204ENST00000366896 SPTLC2O15270 562 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 GPAA1O43292 621 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
PRKN-204ENST00000366896 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms