RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 GTF2E1P29083 439 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-202ENST00000366699 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
TRIM11-202ENST00000366699 LRRC8AQ8IWT6 810 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 ZNF804BA4D1E1 1349 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-202ENST00000366699 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 CMA1P23946 247 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 CDC27P30260 824 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 KRT40Q6A162 431 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 BPIFA3Q9BQP9 254 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 GJB4Q9NTQ9 266 aa20.21■□□□□ 0.83
TRIM11-202ENST00000366699 DOCK2Q92608 1830 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 CYP7A1P22680 504 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 AOPEPQ8N6M6 819 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 LAMB2P55268 1798 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 ZNF202O95125 648 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 RCAN1P53805 252 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 SLC39A14Q15043 492 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
TRIM11-202ENST00000366699 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 RIOK3O14730 519 aaKnown RBP20.19■□□□□ 0.82
TRIM11-202ENST00000366699 TOM1O60784 492 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
TRIM11-202ENST00000366699 RXRAP19793 462 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
TRIM11-202ENST00000366699 WTAPQ15007 396 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 NTRK3Q16288 839 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
TRIM11-202ENST00000366699 ERCC4Q92889 916 aaPredicted RBP20.19■□□□□ 0.82
TRIM11-202ENST00000366699 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 RAI14Q9P0K7 980 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 NID2Q14112 1375 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 PRKAB2O43741 272 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 TRIM22Q8IYM9 498 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 PHKBQ93100 1093 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
TRIM11-202ENST00000366699 A0A087WWV3 80 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 MAGEB6P1A0A0J9YX57 407 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 IFNAR1P17181 557 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
TRIM11-202ENST00000366699 MIGA1Q8NAN2 632 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 PPP6R2O75170 966 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
TRIM11-202ENST00000366699 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 SENP2Q9HC62 589 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 TIAM2Q8IVF5 1701 aa20.18■□□□□ 0.82
TRIM11-202ENST00000366699 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRIM11-202ENST00000366699 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRIM11-202ENST00000366699 FAM98CQ17RN3 349 aaKnown RBP20.17■□□□□ 0.82
TRIM11-202ENST00000366699 C16orf45Q96MC5 204 aaPredicted RBP20.17■□□□□ 0.82
TRIM11-202ENST00000366699 TIGD1Q96MW7 591 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 INCENPQ9NQS7 918 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 FAM217BQ9NTX9 383 aaPredicted RBP20.17■□□□□ 0.82
TRIM11-202ENST00000366699 ECM29Q5VYK3 1845 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 ZNF831Q5JPB2 1677 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 SEMA3EO15041 775 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 PPARAQ07869 468 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 SLC26A6Q9BXS9 759 aa20.17■□□□□ 0.82
TRIM11-202ENST00000366699 PFKFB1P16118 471 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 RTN1Q16799 776 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 TPD52L1Q16890 204 aaPredicted RBP20.16■□□□□ 0.82
TRIM11-202ENST00000366699 DPCR1Q3MIW9 517 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 TSC1Q92574 1164 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 ESR2Q92731 530 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 ANAPC4Q9UJX5 808 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 PAXBP1Q9Y5B6 917 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 MYH14Q7Z406 1995 aaKnown RBP20.16■□□□□ 0.82
TRIM11-202ENST00000366699 TNNT1P13805 278 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 GYG1P46976 350 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 GSDMDP57764 484 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 NLRP12P59046 1061 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 VPS72Q15906 364 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
TRIM11-202ENST00000366699 ZNF710Q8N1W2 664 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 AIFM3Q96NN9 605 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 MYL10Q9BUA6 226 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
TRIM11-202ENST00000366699 CTIFO43310 598 aaKnown RBP20.15■□□□□ 0.82
TRIM11-202ENST00000366699 RANBP6O60518 1105 aaKnown RBP20.15■□□□□ 0.82
TRIM11-202ENST00000366699 TPM4P67936 248 aa20.15■□□□□ 0.82
TRIM11-202ENST00000366699 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
TRIM11-202ENST00000366699 IMPACTQ9P2X3 320 aa20.15■□□□□ 0.82
TRIM11-202ENST00000366699 BCORQ6W2J9 1755 aa20.15■□□□□ 0.82
TRIM11-202ENST00000366699 SMTNL1A8MU46 457 aa20.15■□□□□ 0.82
TRIM11-202ENST00000366699 IQSEC3Q9UPP2 1182 aaPredicted RBP20.15■□□□□ 0.82
TRIM11-202ENST00000366699 COL5A3P25940 1745 aaPredicted RBP20.14■□□□□ 0.82
TRIM11-202ENST00000366699 WDHD1O75717 1129 aaPredicted RBP20.14■□□□□ 0.82
TRIM11-202ENST00000366699 SKILP12757 684 aa20.14■□□□□ 0.82
TRIM11-202ENST00000366699 FILIP1Q7Z7B0 1213 aa20.14■□□□□ 0.82
TRIM11-202ENST00000366699 NLRP3Q96P20 1036 aa20.14■□□□□ 0.82
TRIM11-202ENST00000366699 SETDB2Q96T68 719 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms