RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 SMTNP53814 917 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 BIRC3Q13489 604 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 CTNND2Q9UQB3 1225 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
NID1-202ENST00000366595 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
NID1-202ENST00000366595 ZSCAN26Q16670 478 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 HAUS3Q68CZ6 603 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 FAM71BQ8TC56 605 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 RBSNQ9H1K0 784 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 KRT71Q3SY84 523 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 STX2P32856 288 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 CCT6AP40227 531 aaKnown RBP18.63■□□□□ 0.57
NID1-202ENST00000366595 ST5P78524 1137 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 FANCCQ00597 558 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 ZNF75DP51815 510 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 CCDC51Q96ER9 411 aa18.63■□□□□ 0.57
NID1-202ENST00000366595 CEP104O60308 925 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 DKC1O60832 514 aaKnown RBP eCLIP18.62■□□□□ 0.577e-7■■■□□ 15.6
NID1-202ENST00000366595 RPS6KA1Q15418 735 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 SND1Q7KZF4 910 aaKnown RBP eCLIP18.62■□□□□ 0.574e-8■■■□□ 15.1
NID1-202ENST00000366595 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 SMIM24O75264 130 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 MAGEA1P43355 309 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 LLPHQ9BRT6 129 aaKnown RBP18.62■□□□□ 0.57
NID1-202ENST00000366595 KRT3P12035 628 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 CA8P35219 290 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 PDE4DQ08499 809 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 PPP4R1Q8TF05 950 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 COG7P83436 770 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 RBBP5Q15291 538 aaKnown RBP18.62■□□□□ 0.57
NID1-202ENST00000366595 DBN1Q16643 649 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
NID1-202ENST00000366595 RILPQ96NA2 401 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
NID1-202ENST00000366595 DAPK3O43293 454 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 ATP5J2-PTCD1G3V325 749 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 RGS16O15492 202 aaPredicted RBP18.61■□□□□ 0.57
NID1-202ENST00000366595 PAK1Q13153 545 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 CTTNBP2NLQ9P2B4 639 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 APBA1Q02410 837 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 ZNF804AQ7Z570 1209 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 CSGALNACT2Q8N6G5 542 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
NID1-202ENST00000366595 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
NID1-202ENST00000366595 SLC12A2P55011 1212 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 NME9Q86XW9 330 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 EXOC5O00471 708 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 CUTAO60888 179 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 OPHN1O60890 802 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 CCDC93Q567U6 631 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 EIF2AQ9BY44 585 aaKnown RBP18.6■□□□□ 0.57
NID1-202ENST00000366595 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 IRX5P78411 483 aaPredicted RBP18.6■□□□□ 0.57
NID1-202ENST00000366595 LRCH2Q5VUJ6 765 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 NSMCE1Q8WV22 266 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 ARHGAP4P98171 946 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 CCDC105Q8IYK2 499 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 DACT3Q96B18 629 aaPredicted RBP18.6■□□□□ 0.57
NID1-202ENST00000366595 TRIM4Q9C037 500 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 LRRD1A4D1F6 860 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 GRM8O00222 908 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 EVI5O60447 810 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 APOBRQ0VD83 1088 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 VPS16Q9H269 839 aa18.6■□□□□ 0.57
NID1-202ENST00000366595 PHBP35232 272 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 KCNH3Q9ULD8 1083 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 CCDC89Q8N998 374 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 SPATS2LQ9NUQ6 558 aaKnown RBP18.59■□□□□ 0.57
NID1-202ENST00000366595 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.59■□□□□ 0.57
NID1-202ENST00000366595 INPP1P49441 399 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 PPANQ9NQ55 473 aaKnown RBP18.59■□□□□ 0.57
NID1-202ENST00000366595 PDCD2Q16342 344 aaPredicted RBP18.59■□□□□ 0.57
NID1-202ENST00000366595 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 RNF34Q969K3 372 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 SDCCAG3Q96C92 435 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
NID1-202ENST00000366595 NAIPQ13075 1403 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 VWA3AA6NCI4 1184 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 DEXIO95424 95 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 RPS6KA2Q15349 733 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 NLRP12P59046 1061 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.57
NID1-202ENST00000366595 BCRP11274 1271 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 MRRFQ96E11 262 aaKnown RBP18.58■□□□□ 0.56
NID1-202ENST00000366595 MEIS3Q99687 375 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 TRIM31Q9BZY9 425 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 SH2D4AQ9H788 454 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 PHF8Q9UPP1 1060 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 A0A1B0GVL5 298 aa18.58■□□□□ 0.56
NID1-202ENST00000366595 ZNF445P59923 1031 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms