RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 HCLS1P14317 486 aaPredicted RBP7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 ADMP35318 185 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 GRIK1P39086 918 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 MEI1Q5TIA1 1274 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 TTBK2Q6IQ55 1244 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 SHISA5Q8N114 240 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 CACNA2D2Q9NY47 1150 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 CYP8B1Q9UNU6 501 aa7.29□□□□□ -1.24
RNU6-553P-201ENST00000364047 CD97P48960 835 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 XP32Q5T750 250 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 TMCO4Q5TGY1 634 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 SMYD4Q8IYR2 804 aaPredicted RBP7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 PCMTD2Q9NV79 361 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 PIM2Q9P1W9 311 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 LEMD3Q9Y2U8 911 aa7.28□□□□□ -1.24
RNU6-553P-201ENST00000364047 FAM170BA6NMN3 283 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 SORBS3O60504 671 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 ERVK-24P63145 666 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 CPSF6Q16630 551 aaKnown RBP eCLIP7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 SCARA3Q6AZY7 606 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 INTS5Q6P9B9 1019 aaKnown RBP7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 SEZ6L2Q6UXD5 910 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 GATA6Q92908 595 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 METTL22Q9BUU2 404 aaPredicted RBP7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 BCL2L13Q9BXK5 485 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 VTI1BQ9UEU0 232 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 PCDHA4Q9UN74 947 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 CSADQ9Y600 493 aa7.27□□□□□ -1.25
RNU6-553P-201ENST00000364047 DCDC2CA8MYV0 355 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 MED26O95402 600 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 NEFMP07197 916 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 CTSHP09668 335 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 LMNB1P20700 586 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 MAP3K11Q16584 847 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 NBPF11Q86T75 865 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 RNF214Q8ND24 703 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 ISL2Q96A47 359 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 SSU72Q9NP77 194 aaKnown RBP7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 C1GALT1Q9NS00 363 aa7.26□□□□□ -1.25
RNU6-553P-201ENST00000364047 CYP27A1Q02318 531 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 CDK5R2Q13319 367 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 TAF1CQ15572 869 aaPredicted RBP7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 PPM1JQ5JR12 505 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 C12orf40Q86WS4 652 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 GIPC2Q8TF65 315 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 CRELD1Q96HD1 420 aa7.25□□□□□ -1.25
RNU6-553P-201ENST00000364047 KIAA1324LA8MWY0 1029 aaPredicted RBP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 FOSL1P15407 271 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 HOXA10P31260 410 aaPredicted RBP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 ITGAEP38570 1179 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 LIG3P49916 1009 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 ST13P50502 369 aaKnown RBP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 RPS26P62854 115 aaKnown RBP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 PTPN11Q06124 597 aaPredicted RBP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 ZNF765Q7L2R6 523 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 GAL3ST3Q96A11 431 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 ELMO3Q96BJ8 720 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 PCOLCE2Q9UKZ9 415 aa7.24□□□□□ -1.25
RNU6-553P-201ENST00000364047 CYP26A1O43174 497 aa7.23□□□□□ -1.25
RNU6-553P-201ENST00000364047 ZNF326Q5BKZ1 582 aaKnown RBP7.23□□□□□ -1.25
RNU6-553P-201ENST00000364047 LRFN4Q6PJG9 635 aa7.23□□□□□ -1.25
RNU6-553P-201ENST00000364047 NOC4LQ9BVI4 516 aaKnown RBP7.23□□□□□ -1.25
RNU6-553P-201ENST00000364047 LRRC4CQ9HCJ2 640 aa7.23□□□□□ -1.25
RNU6-553P-201ENST00000364047 FANCGO15287 622 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 RLBP1P12271 317 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 SPINK2P20155 84 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 SEPT6Q14141 434 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 INPP5AQ14642 412 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 ZBTB37Q5TC79 503 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 OGFOD3Q6PK18 319 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 AGMOQ6ZNB7 445 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 HDXQ7Z353 690 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 PCDHB5Q9Y5E4 795 aa7.22□□□□□ -1.25
RNU6-553P-201ENST00000364047 USP31Q70CQ4 1352 aa7.21□□□□□ -1.25
RNU6-553P-201ENST00000364047 PRAMEF27A3QJZ7 478 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 NTF4P34130 210 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 MFAP1P55081 439 aaKnown RBP7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 RING1Q06587 406 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 CYP27C1Q4G0S4 372 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 WIPI1Q5MNZ9 446 aaPredicted RBP7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 MIR1-1HGQ9H1L0 117 aa7.21□□□□□ -1.26
RNU6-553P-201ENST00000364047 DTX1Q86Y01 620 aa7.2□□□□□ -1.26
RNU6-553P-201ENST00000364047 BCL11AQ9H165 835 aa7.2□□□□□ -1.26
RNU6-553P-201ENST00000364047 TLR6Q9Y2C9 796 aa7.2□□□□□ -1.26
RNU6-553P-201ENST00000364047 F6X3S4 739 aa7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 TFE3P19532 575 aaPredicted RBP7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 CDK8P49336 464 aa7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 CYFIP1Q7L576 1253 aa7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 UBE3DQ7Z6J8 389 aa7.19□□□□□ -1.26
RNU6-553P-201ENST00000364047 TOP6BLQ8N6T0 577 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms