RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 ZDHHC15Q96MV8 337 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 DEFB118Q96PH6 123 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 CHMP4AQ9BY43 222 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF341Q9BYN7 854 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 CCDC8Q9H0W5 538 aaPredicted RBP1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 C1orf115Q9H7X2 142 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 DDX4Q9NQI0 724 aaKnown RBP1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 SMC4Q9NTJ3 1288 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 TMOD2Q9NZR1 351 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 RAI14Q9P0K7 980 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 CEP126Q9P2H0 1117 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 SRRDQ9UH36 339 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 SAP30BPQ9UHR5 308 aaKnown RBP1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 DAGLAQ9Y4D2 1042 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 PPP2R3BQ9Y5P8 575 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 LRRFIP2Q9Y608 721 aaKnown RBP1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 IL16Q14005 1332 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 MROH5Q6ZUA9 1318 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 MYPNQ86TC9 1320 aa1.91□□□□□ -2.1
RNU1-42P-201ENST00000364033 TRPM7Q96QT4 1865 aa1.9□□□□□ -2.1
RNU1-42P-201ENST00000364033 KDM3BQ7LBC6 1761 aa1.9□□□□□ -2.1
RNU1-42P-201ENST00000364033 SSC5DA1L4H1 1573 aa1.9□□□□□ -2.1
RNU1-42P-201ENST00000364033 PNMA6EA0A0J9YXQ4 647 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 A0A1B0GUL7 405 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PHF20L1A8MW92 1017 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 TNPO2O14787 897 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SRGAP3O43295 1099 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 WDHD1O75717 1129 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 FARP2O94887 1054 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 GDF11O95390 407 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SGPL1O95470 568 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 INHAP05111 366 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 UBTFL1P0CB47 393 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 CNGA1P29973 690 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ANP32AP39687 249 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 GJA8P48165 433 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ATN1P54259 1190 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 HMGCS2P54868 508 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 FCGRTP55899 365 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 UBXN2AP68543 259 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 MDM2Q00987 491 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 MECOMQ03112 1051 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 EVX2Q03828 476 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SLFN5Q08AF3 891 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PPIL2Q13356 520 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 RASGRF1Q13972 1273 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ARHGEF6Q15052 776 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PUM3Q15397 648 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 CCL14Q16627 93 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 RABL6Q3YEC7 729 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 NOM1Q5C9Z4 860 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PRAMEF19Q5SWL8 479 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 WDR78Q5VTH9 848 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ANO1Q5XXA6 986 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 DCAF15Q66K64 600 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 CCDC102BQ68D86 513 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 HHIPL2Q6UWX4 724 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ANKRD23Q86SG2 305 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 DZIP1Q86YF9 867 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 CCAR1Q8IX12 1150 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 C7orf61Q8IZ16 206 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SCYL3Q8IZE3 742 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 VGLL2Q8N8G2 317 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 MIGA1Q8NAN2 632 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 WDR66Q8TBY9 1149 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SH3RF3Q8TEJ3 882 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SMCR8Q8TEV9 937 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ZNF384Q8TF68 577 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 U2AF1L4Q8WU68 220 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 TBC1D22AQ8WUA7 517 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 TGFBRAP1Q8WUH2 860 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SHISA4Q96DD7 197 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 P2RX7Q99572 595 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 MEIS3Q99687 375 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PAGR1Q9BTK6 254 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 CFHR5Q9BXR6 569 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 SENP6Q9GZR1 1112 aaPredicted RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PRDM6Q9NQX0 595 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PICK1Q9NRD5 415 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 GNL3LQ9NVN8 582 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 AATFQ9NY61 560 aaKnown RBP eCLIP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 HMG20BQ9P0W2 317 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 LRP2BPQ9P2M1 347 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ZNF112Q9UJU3 913 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 PALD1Q9ULE6 856 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 AFG3L2Q9Y4W6 797 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 DDX60Q8IY21 1712 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 KIAA0100Q14667 2235 aaKnown RBP1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 LAMB2P55268 1798 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 ARFGEF2Q9Y6D5 1785 aa1.9□□□□□ -2.11
RNU1-42P-201ENST00000364033 GPR75-ASB3A0A0A6YYF3 556 aa1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 A0A0G2JLL6 359 aaPredicted RBP1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 E9PSI1 815 aa1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 SMIM22K7EJ46 135 aa1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 CXCL11O14625 94 aa1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 ZBTB7BO15156 539 aaPredicted RBP1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 RAD21O60216 631 aa1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 CTNND1O60716 968 aaKnown RBP1.89□□□□□ -2.11
RNU1-42P-201ENST00000364033 SURF6O75683 361 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms