RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 GPR162Q16538 588 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 EPHA10Q5JZY3 1008 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 TOP6BLQ8N6T0 577 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 CEP120Q8N960 986 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 GAS2L2Q8NHY3 880 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 SCG3Q8WXD2 468 aaKnown RBP1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 ZG16BQ96DA0 208 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 GSX1Q9H4S2 264 aaPredicted RBP1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 SOX17Q9H6I2 414 aaPredicted RBP1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 SIRT5Q9NXA8 310 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 SOX13Q9UN79 622 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 KCNMB2Q9Y691 235 aa1.82□□□□□ -2.12
RNU6-478P-201ENST00000363904 PDE2AO00408 941 aaPredicted RBP1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 C21orf2O43822 256 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 HPXP02790 462 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 CNR2P34972 360 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 TRHRP34981 398 aaPredicted RBP1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 SLURP1P55000 103 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 SRSF3P84103 164 aaKnown RBP1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 NKPD1Q17RQ9 610 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 NT5DC1Q5TFE4 455 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 INTS4Q96HW7 963 aaKnown RBP1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 PWWP2AQ96N64 755 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 ZFYVE1Q9HBF4 777 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 LTBP3Q9NS15 1303 aa1.81□□□□□ -2.12
RNU6-478P-201ENST00000363904 SERINC4A6NH21 518 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 UBAP1LF5GYI3 381 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 APBB1O00213 710 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 IGF2BP3O00425 579 aaKnown RBP eCLIP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 N4BP3O15049 544 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 LZTS3O60299 673 aaPredicted RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 GPR37L1O60883 481 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 EPHB3P54753 998 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 CCDC102BQ68D86 513 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 SMYD4Q8IYR2 804 aaPredicted RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 TSEN2Q8NCE0 465 aaKnown RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 BSNDQ8WZ55 320 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 DDX1Q92499 740 aaKnown RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 HEXIM2Q96MH2 286 aaKnown RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 CWC22Q9HCG8 908 aaKnown RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 EPB41L4AQ9HCS5 686 aaPredicted RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 TMEM59LQ9UK28 342 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 TSC22D4Q9Y3Q8 395 aa1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 RBM19Q9Y4C8 960 aaKnown RBP1.8□□□□□ -2.12
RNU6-478P-201ENST00000363904 DNAJC25-GNG10A0A024R161 153 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 PROB1E7EW31 1015 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 M0R2N6 131 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 RNGTTO60942 597 aaKnown RBP1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 AOC2O75106 756 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 CYP11A1P05108 521 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 MAOBP27338 520 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 C11orf91Q3C1V1 193 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 TRIM50Q86XT4 487 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 LILRA2Q8N149 483 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 TP53I13Q8NBR0 393 aaPredicted RBP1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 PPP1R13LQ8WUF5 828 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 HSPA12BQ96MM6 686 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 ZNF341Q9BYN7 854 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 DNAJC25Q9H1X3 360 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 C19orf44Q9H6X5 657 aa1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 MBD1Q9UIS9 605 aaPredicted RBP1.79□□□□□ -2.12
RNU6-478P-201ENST00000363904 FAM155AB1AL88 458 aaPredicted RBP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 CTGFP29279 349 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 POU4F3Q15319 338 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 RALGPS1Q5JS13 557 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 ZNF362Q5T0B9 420 aaPredicted RBP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 CDKAL1Q5VV42 579 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 FAM129CQ86XR2 697 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 CDK5RAP1Q96SZ6 601 aaKnown RBP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 RBM15Q96T37 977 aaKnown RBP eCLIP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 IKZF4Q9H2S9 585 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 ATXN3LQ9H3M9 355 aa1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 SSU72Q9NP77 194 aaKnown RBP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 YBX2Q9Y2T7 364 aaKnown RBP1.78□□□□□ -2.12
RNU6-478P-201ENST00000363904 OR14I1A6ND48 311 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 H3BS24 57 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 CYP2E1P05181 493 aaPredicted RBP1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 ESRRAP11474 423 aaPredicted RBP1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 ATP1A2P50993 1020 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 NCOA4Q13772 614 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 TRIP4Q15650 581 aaPredicted RBP1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 VN1R5Q7Z5H4 357 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 TMEFF1Q8IYR6 380 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 CORO1BQ9BR76 489 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 FOXQ1Q9C009 403 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 ST6GALNAC2Q9UJ37 374 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 PCOLCE2Q9UKZ9 415 aa1.77□□□□□ -2.13
RNU6-478P-201ENST00000363904 IRS4O14654 1257 aaPredicted RBP1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 TRPA1O75762 1119 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 PDE3AQ14432 1141 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 CCDC142Q17RM4 750 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 OXR1Q8N573 874 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 USP33Q8TEY7 942 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 DZANK1Q9NVP4 752 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 ABI2Q9NYB9 513 aaPredicted RBP1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 KANSL3Q9P2N6 904 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 PPP1R9AQ9ULJ8 1098 aa1.76□□□□□ -2.13
RNU6-478P-201ENST00000363904 FNDC3AQ9Y2H6 1198 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms