RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DBF4Q9UBU7 674 aaPredicted RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 USP42Q9H9J4 1324 aaKnown RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 ZAP70P43403 619 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 TMX3Q96JJ7 454 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 DMGDHQ9UI17 866 aaKnown RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 INPP5FQ9Y2H2 1132 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 A6NJY4 79 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 MCCP23508 829 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.8□□□□□ -1
CLCN3-202ENST00000360642 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 RRAGDQ9NQL2 400 aaPredicted RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 LILRA1O75019 489 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ANXA1P04083 346 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 C1orf141Q5JVX7 400 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ZDHHC1Q8WTX9 485 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 FBXO24O75426 580 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ALDH1L1O75891 902 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 IL2RAP01589 272 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ATP2B1P20020 1258 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 HSPA4P34932 840 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 TLR1Q15399 786 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 MCTP1Q6DN14 999 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ALDH16A1Q8IZ83 802 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 ZNF592Q92610 1267 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 GPATCH3Q96I76 525 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 AGBL1Q96MI9 1066 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 FAM129BQ96TA1 746 aa8.79□□□□□ -1
CLCN3-202ENST00000360642 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
CLCN3-202ENST00000360642 DDX49Q9Y6V7 483 aaKnown RBP8.79□□□□□ -1
CLCN3-202ENST00000360642 POLR3DP05423 398 aaPredicted RBP8.78□□□□□ -1
CLCN3-202ENST00000360642 HSP90AB4PQ58FF6 505 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 KSR2Q6VAB6 950 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
CLCN3-202ENST00000360642 PROSER3Q2NL68 480 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 OSBPL7Q9BZF2 842 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 MAP3K2Q9Y2U5 619 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 KIF1AQ12756 1690 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
CLCN3-202ENST00000360642 SGSM2O43147 1006 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 NPR3P17342 541 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 KRT28Q7Z3Y7 464 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 GGT7Q9UJ14 662 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 UTYO14607 1347 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 TTC41PQ6P2S7 1318 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 C1orf167Q5SNV9 1468 aa8.78□□□□□ -1
CLCN3-202ENST00000360642 PRAMEF22A3QJZ6 481 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 ZNF445P59923 1031 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 ALS2Q96Q42 1657 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
CLCN3-202ENST00000360642 HYPKQ9NX55 129 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 MRPL42Q9Y6G3 142 aaKnown RBP8.77□□□□□ -1.01
CLCN3-202ENST00000360642 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 RAD50Q92878 1312 aa8.77□□□□□ -1.01
CLCN3-202ENST00000360642 CNTROBQ8N137 903 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 LSG1Q9H089 658 aaKnown RBP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 RNF223E7ERA6 249 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 MAP4K4O95819 1239 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 MCCD1P59942 119 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 TRIM56Q9BRZ2 755 aaKnown RBP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 KDF1Q8NAX2 398 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 GPT2Q8TD30 523 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 KAZALD1Q96I82 304 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
CLCN3-202ENST00000360642 DDX21Q9NR30 783 aaKnown RBP eCLIP8.76□□□□□ -1.01
CLCN3-202ENST00000360642 GLRX3O76003 335 aaKnown RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 ATP2B2Q01814 1243 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 ENOX2Q16206 610 aaKnown RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 LINS1Q8NG48 757 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 HSH2DQ96JZ2 352 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 C19orf44Q9H6X5 657 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 PDGFAP04085 211 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 ZSCAN23Q3MJ62 389 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 ABCC6O95255 1503 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 GNA15P30679 374 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 TXLNAP40222 546 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 JAZF1Q86VZ6 243 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 TREML1Q86YW5 311 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 TTC14Q96N46 770 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 UPF3BQ9BZI7 483 aaKnown RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 PCDH10Q9P2E7 1040 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 SNX14Q9Y5W7 946 aa8.75□□□□□ -1.01
CLCN3-202ENST00000360642 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-202ENST00000360642 KDM6AO15550 1401 aaPredicted RBP8.74□□□□□ -1.01
CLCN3-202ENST00000360642 SCN11AQ9UI33 1791 aa8.74□□□□□ -1.01
CLCN3-202ENST00000360642 GRM8O00222 908 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms