RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 VWA3BQ502W6 1294 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 VSIG10Q8N0Z9 540 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 AATFQ9NY61 560 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 SNX14Q9Y5W7 946 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ALKQ9UM73 1620 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 H7C1D1 291 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 SLC1A4P43007 532 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CHST3Q7LGC8 479 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CNGA4Q8IV77 575 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 IQCDQ96DY2 449 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 COPRSQ9NQ92 184 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 RASAL2Q9UJF2 1139 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 TNNQ9UQP3 1299 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 TACC1O75410 805 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CEP135Q66GS9 1140 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 TCHPQ9BT92 498 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 PUF60Q9UHX1 559 aaKnown RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 LMTK2Q8IWU2 1503 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ZBED4O75132 1171 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 MYCNP04198 464 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 AKNAD1Q5T1N1 836 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 TRMT2AQ8IZ69 625 aaKnown RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CEP112Q8N8E3 955 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 FAM107BQ9H098 131 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 FAM193AP78312 1265 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ANO1Q5XXA6 986 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ISM2Q6H9L7 571 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 ERBB3P21860 1342 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 RRP9O43818 475 aaKnown RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CALUO43852 315 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 EPB41P11171 864 aaKnown RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 SNX16P57768 344 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 MAP2K1Q02750 393 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 UBE4AQ14139 1066 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 DLGAP5Q15398 846 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 E9PCH4 1651 aa5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CLTCQ00610 1675 aaKnown RBP5.48□□□□□ -1.53
SCN3A-202ENST00000360093 CTAGE9A4FU28 777 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SPDYE4A6NLX3 237 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 GNG11P61952 73 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 UBE3CQ15386 1083 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MICALCLQ6ZW33 695 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 KIFAP3Q92845 792 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MED14O60244 1454 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 CCNT1O60563 726 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 DCAF15Q66K64 600 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 CHURC1Q8WUH1 139 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 NUP58Q9BVL2 599 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 FSD2A1L4K1 749 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 ADCY7P51828 1080 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SMC1AQ14683 1233 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 AOPEPQ8N6M6 819 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 IFT74Q96LB3 600 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 CCDC42Q96M95 316 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 C16orf45Q96MC5 204 aaPredicted RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SAP30BPQ9UHR5 308 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 GJA3Q9Y6H8 435 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 ZAP70P43403 619 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MYL5Q02045 173 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SREK1Q8WXA9 508 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 BACH1O14867 736 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 TAF5LO75529 589 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 HLTFQ14527 1009 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 LETM2Q2VYF4 491 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MLKLQ8NB16 471 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 XDHP47989 1333 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 ERCC6L2Q5T890 1561 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 BBOX1O75936 387 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 PDE8BO95263 885 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SPECC1Q5M775 1068 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 TAF3Q5VWG9 929 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 FAM227BQ96M60 508 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 NT5C3AQ9H0P0 336 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 TRMT1Q9NXH9 659 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 STAP2Q9UGK3 403 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 CPSF1Q10570 1443 aaKnown RBP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 E7EWF7 191 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SKILP12757 684 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 NONOQ15233 471 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MFSD14BQ5SR56 506 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 CEP128Q6ZU80 1094 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 GPCPD1Q9NPB8 672 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 SWAP70Q9UH65 585 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 TULP4Q9NRJ4 1543 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 KDM3AQ9Y4C1 1321 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 MED23Q9ULK4 1368 aa5.47□□□□□ -1.53
SCN3A-202ENST00000360093 VWA3AA6NCI4 1184 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 ATP2A1O14983 1001 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 PPIP5K2O43314 1243 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 UBXN1Q04323 297 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 PABPC4Q13310 644 aaKnown RBP eCLIP5.46□□□□□ -1.53
SCN3A-202ENST00000360093 PRPF4BQ13523 1007 aaKnown RBP5.46□□□□□ -1.53
SCN3A-202ENST00000360093 TUBB2AQ13885 445 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 DDX17Q92841 729 aaKnown RBP5.46□□□□□ -1.53
SCN3A-202ENST00000360093 IWS1Q96ST2 819 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 TUBB2BQ9BVA1 445 aa5.46□□□□□ -1.53
SCN3A-202ENST00000360093 MMRN2Q9H8L6 949 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms