RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 RAD17O75943 681 aa16.29■□□□□ 0.2
CSNK1E-201ENST00000359867 FGAP02671 866 aa16.29■□□□□ 0.2
CSNK1E-201ENST00000359867 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-201ENST00000359867 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
CSNK1E-201ENST00000359867 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
CSNK1E-201ENST00000359867 SALL1Q9NSC2 1324 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 MIGA1Q8NAN2 632 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 PDCP20941 246 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 CYP7A1P22680 504 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
CSNK1E-201ENST00000359867 ZBTB22O15209 634 aa16.27■□□□□ 0.2
CSNK1E-201ENST00000359867 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-201ENST00000359867 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-201ENST00000359867 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-201ENST00000359867 LTBP3Q9NS15 1303 aa16.27■□□□□ 0.2
CSNK1E-201ENST00000359867 DACT2Q5SW24 774 aa16.27■□□□□ 0.19
CSNK1E-201ENST00000359867 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.19
CSNK1E-201ENST00000359867 JDP2Q8WYK2 163 aa16.27■□□□□ 0.19
CSNK1E-201ENST00000359867 GTF3C6Q969F1 213 aa16.27■□□□□ 0.19
CSNK1E-201ENST00000359867 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.19
CSNK1E-201ENST00000359867 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 ZNF213O14771 459 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 F13A1P00488 732 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 ALX1Q15699 326 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
CSNK1E-201ENST00000359867 GPR162Q16538 588 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 BRF1Q92994 677 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 MAST2Q6P0Q8 1798 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 PSMD14O00487 310 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 PFKFB2O60825 505 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 SCNN1DP51172 638 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 LLPHQ9BRT6 129 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 MTMR6Q9Y217 621 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 WDR19Q8NEZ3 1342 aa16.25■□□□□ 0.19
CSNK1E-201ENST00000359867 MBD4O95243 580 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 MBD3O95983 291 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 CXCL9Q07325 125 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 LARP1BQ659C4 914 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 STRBPQ96SI9 672 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 ARMT1Q9H993 441 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 TTF2Q9UNY4 1162 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 ADAMTSL1Q8N6G6 1762 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 OFD1O75665 1012 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 LCORLQ8N3X6 602 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 TMEM87AQ8NBN3 555 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 ZNF274Q96GC6 653 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-201ENST00000359867 PSME4Q14997 1843 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 EVCP57679 992 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 DYNLL1P63167 89 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 SBF1O95248 1867 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 PATL2C9JE40 543 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 GNAT2P19087 354 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 STK3Q13188 491 aa16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
CSNK1E-201ENST00000359867 MCM5P33992 734 aa16.22■□□□□ 0.19
CSNK1E-201ENST00000359867 LRSAM1Q6UWE0 723 aa16.22■□□□□ 0.19
CSNK1E-201ENST00000359867 LMNB1P20700 586 aa16.22■□□□□ 0.19
CSNK1E-201ENST00000359867 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
CSNK1E-201ENST00000359867 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
CSNK1E-201ENST00000359867 PRKAB2O43741 272 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 HAND2P61296 217 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 APPP05067 770 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 SCRN1Q12765 414 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 SMARCC2Q8TAQ2 1214 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 PDLIM2Q96JY6 352 aa16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-201ENST00000359867 TCHHQ07283 1943 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 VIL1P09327 827 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 TRDNQ13061 729 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 CIAPIN1Q6FI81 312 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 RSBN1LQ6PCB5 846 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms