RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PLCH1Q4KWH8 1693 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 MYH3P11055 1940 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 ZNF202O95125 648 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 RXRAP19793 462 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 NDUFA8P51970 172 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 MYRIPQ8NFW9 859 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 LAMA4Q16363 1823 aa10.75□□□□□ -0.69
GTF3C2-202ENST00000359541 NEDD4P46934 1319 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 DEXIO95424 95 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 NTSR2O95665 410 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 IQCA1Q86XH1 822 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 NUP133Q8WUM0 1156 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 LY9Q9HBG7 655 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 CUTAO60888 179 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 IFNAR1P17181 557 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 C11orf57Q6ZUT1 292 aaPredicted RBP10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 PHKBQ93100 1093 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 FMNL1O95466 1100 aaPredicted RBP10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 ILDR1Q86SU0 546 aaPredicted RBP10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 MIGA1Q8NAN2 632 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 IGDCC4Q8TDY8 1250 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 ZSWIM5Q9P217 1185 aa10.74□□□□□ -0.69
GTF3C2-202ENST00000359541 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 CBFA2T2O43439 604 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 SMC2O95347 1197 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 PFKFB1P16118 471 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 NLRP12P59046 1061 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 IQCB1Q15051 598 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 TPD52L1Q16890 204 aaPredicted RBP10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 MYH7P12883 1935 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 GSG1L2A8MUP6 293 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 SEMA3EO15041 775 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 RGL2O15211 777 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 AP5Z1O43299 807 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 MARCKSP29966 332 aaPredicted RBP10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 PPARAQ07869 468 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 LCORLQ8N3X6 602 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 CALM1P0DP23 149 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 CALM2P0DP24 149 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 CALM3P0DP25 149 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 MARCH10Q8NA82 808 aaPredicted RBP10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 ANKRD2Q9GZV1 360 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 SPATA31A5Q5VU36 1347 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 SPATA31A7Q8IWB4 1347 aa10.73□□□□□ -0.69
GTF3C2-202ENST00000359541 FILIP1Q7Z7B0 1213 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 EPB41L4AQ9HCS5 686 aaPredicted RBP10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 IMPACTQ9P2X3 320 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 NUP98P52948 1817 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 ZPR1O75312 459 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 TMED8Q6PL24 325 aaPredicted RBP10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 NOSTRINQ8IVI9 506 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 CCDC150Q8NCX0 1101 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 BSDC1Q9NW68 430 aaPredicted RBP10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 CDC27P30260 824 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 ITPK1Q13572 414 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 MYL10Q9BUA6 226 aa10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
GTF3C2-202ENST00000359541 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 LRP5O75197 1615 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 KIF28PB7ZC32 967 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 KIF2AO00139 706 aaPredicted RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 BMP15O95972 392 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 SF3B3Q15393 1217 aaKnown RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 DIS3L2Q8IYB7 885 aaKnown RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 ZNF654Q8IZM8 581 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 SETDB2Q96T68 719 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 FOXP1Q9H334 677 aaPredicted RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 MYO1BO43795 1136 aa10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 U2AF2P26368 475 aaKnown RBP eCLIP10.71□□□□□ -0.696e-12■■■□□ 15.3
GTF3C2-202ENST00000359541 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 CRNKL1Q9BZJ0 848 aaKnown RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 IQSEC3Q9UPP2 1182 aaPredicted RBP10.71□□□□□ -0.69
GTF3C2-202ENST00000359541 DOT1LQ8TEK3 1739 aa10.71□□□□□ -0.7
GTF3C2-202ENST00000359541 COL22A1Q8NFW1 1626 aaPredicted RBP10.71□□□□□ -0.7
GTF3C2-202ENST00000359541 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.7
GTF3C2-202ENST00000359541 PAXBP1Q9Y5B6 917 aa10.71□□□□□ -0.7
GTF3C2-202ENST00000359541 BIN1O00499 593 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 CCP110O43303 1012 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms