RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 TIGD1Q96MW7 591 aa23.87■■□□□ 1.41
TRIM3-202ENST00000359518 INTS13Q9NVM9 706 aa23.87■■□□□ 1.41
TRIM3-202ENST00000359518 PPP6R2O75170 966 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 CDK11BP21127 795 aaKnown RBP23.86■■□□□ 1.41
TRIM3-202ENST00000359518 ADKP55263 362 aaKnown RBP23.86■■□□□ 1.41
TRIM3-202ENST00000359518 NTRK3Q16288 839 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 TRIM65Q6PJ69 517 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 VSTM4Q8IW00 320 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 TTLL11Q8NHH1 800 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 ZSWIM5Q9P217 1185 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 SLC12A7Q9Y666 1083 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 CSF1RP07333 972 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 LY9Q9HBG7 655 aa23.86■■□□□ 1.41
TRIM3-202ENST00000359518 CBFA2T2O43439 604 aa23.85■■□□□ 1.41
TRIM3-202ENST00000359518 PRR29P0C7W0 189 aa23.85■■□□□ 1.41
TRIM3-202ENST00000359518 H2AFXP16104 143 aaPredicted RBP23.85■■□□□ 1.41
TRIM3-202ENST00000359518 POLR2DO15514 142 aaKnown RBP23.85■■□□□ 1.41
TRIM3-202ENST00000359518 REXO1L1PQ8IX06 675 aa23.85■■□□□ 1.41
TRIM3-202ENST00000359518 COL18A1P39060 1754 aa23.85■■□□□ 1.41
TRIM3-202ENST00000359518 TMOD3Q9NYL9 352 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 MST1RQ04912 1400 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 FMR1Q06787 632 aaKnown RBP eCLIP23.84■■□□□ 1.41
TRIM3-202ENST00000359518 SSRP1Q08945 709 aaKnown RBP23.84■■□□□ 1.41
TRIM3-202ENST00000359518 ARMT1Q9H993 441 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 TBC1D2BQ9UPU7 963 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 TACC3Q9Y6A5 838 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 ANKRD18BA2A2Z9 1011 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 NR5A1Q13285 461 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 ZBTB9Q96C00 473 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 NAPBQ9H115 298 aa23.84■■□□□ 1.41
TRIM3-202ENST00000359518 RIC1Q4ADV7 1423 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 SPATA31A3Q5VYP0 1347 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 PRKAB2O43741 272 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 SEC31AO94979 1220 aaKnown RBP23.83■■□□□ 1.41
TRIM3-202ENST00000359518 MBD4O95243 580 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 MAGEB6Q8N7X4 407 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 KRI1Q8N9T8 703 aaKnown RBP23.83■■□□□ 1.41
TRIM3-202ENST00000359518 STRBPQ96SI9 672 aaKnown RBP23.83■■□□□ 1.41
TRIM3-202ENST00000359518 DESI2Q9BSY9 194 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 SERTAD1Q9UHV2 236 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 NFE2L3Q9Y4A8 694 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.41
TRIM3-202ENST00000359518 CUTAO60888 179 aa23.83■■□□□ 1.4
TRIM3-202ENST00000359518 IL2RBP14784 551 aa23.83■■□□□ 1.4
TRIM3-202ENST00000359518 DIS3L2Q8IYB7 885 aaKnown RBP23.83■■□□□ 1.4
TRIM3-202ENST00000359518 TRMT112Q9UI30 125 aaKnown RBP23.83■■□□□ 1.4
TRIM3-202ENST00000359518 TOB1P50616 345 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-202ENST00000359518 GNG11P61952 73 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 USP49Q70CQ1 688 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 PPP2R2CQ9Y2T4 447 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 FHOD1Q9Y613 1164 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 IRS4O14654 1257 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-202ENST00000359518 NOSTRINQ8IVI9 506 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 NUP133Q8WUM0 1156 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 WDR24Q96S15 920 aa23.82■■□□□ 1.4
TRIM3-202ENST00000359518 EPB41L4AQ9HCS5 686 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-202ENST00000359518 BMS1Q14692 1282 aaKnown RBP23.81■■□□□ 1.4
TRIM3-202ENST00000359518 FBXO3Q9UK99 471 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 MAN1B1Q9UKM7 699 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 WDR19Q8NEZ3 1342 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 TOGARAM2Q6ZUX3 1019 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 TMEM87BQ96K49 555 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 TNS3Q68CZ2 1445 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 NUP188Q5SRE5 1749 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 MYO5AQ9Y4I1 1855 aaKnown RBP23.81■■□□□ 1.4
TRIM3-202ENST00000359518 LAMB4A4D0S4 1761 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 VWA3AA6NCI4 1184 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 PDE8BO95263 885 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 KCNJ6P48051 423 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 NLRP10Q86W26 655 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 IFNL3Q8IZI9 196 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 BAG1Q99933 345 aaPredicted RBP23.81■■□□□ 1.4
TRIM3-202ENST00000359518 PCDHB6Q9Y5E3 794 aa23.81■■□□□ 1.4
TRIM3-202ENST00000359518 KCPQ6ZWJ8 1503 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 PNMA6AP0CW24 399 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 CTSWP56202 376 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 KARSQ15046 597 aaKnown RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 TTF1Q15361 905 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 UBE3CQ15386 1083 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 SAMSN1Q9NSI8 373 aaKnown RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 FAM53CQ9NYF3 392 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 SPEF2Q9C093 1822 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 POLR3GO15318 223 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 POSTNQ15063 836 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.8■■□□□ 1.4
TRIM3-202ENST00000359518 PARP3Q9Y6F1 533 aa23.8■■□□□ 1.4
TRIM3-202ENST00000359518 TMEM139Q8IV31 216 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 OXER1Q8TDS5 423 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 PHLPP2Q6ZVD8 1323 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 hCG_1642624A0A1W2PR95 340 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 EVA1CP58658 441 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 TRIM28Q13263 835 aaKnown RBP23.79■■□□□ 1.4
TRIM3-202ENST00000359518 SAFBQ15424 915 aaKnown RBP eCLIP23.79■■□□□ 1.4
TRIM3-202ENST00000359518 KLHL10Q6JEL2 608 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 ZSWIM4Q9H7M6 989 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 SEC31BQ9NQW1 1179 aa23.79■■□□□ 1.4
TRIM3-202ENST00000359518 CCP110O43303 1012 aa23.78■■□□□ 1.4
TRIM3-202ENST00000359518 CASP1P29466 404 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms