RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PRKAB2O43741 272 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
CCDC197-201ENST00000359253 MCM4P33991 863 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 PPARAQ07869 468 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
CCDC197-201ENST00000359253 TNIP1Q15025 636 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 MFSD14BQ5SR56 506 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 AMOTL1Q8IY63 956 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 GPC2Q8N158 579 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 TMTC2Q8N394 836 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
CCDC197-201ENST00000359253 DICER1Q9UPY3 1922 aaKnown RBP15.89■□□□□ 0.13
CCDC197-201ENST00000359253 GPR75-ASB3A0A0A6YYF3 556 aa15.88■□□□□ 0.13
CCDC197-201ENST00000359253 BRD1O95696 1058 aa15.88■□□□□ 0.13
CCDC197-201ENST00000359253 FGRP09769 529 aa15.88■□□□□ 0.13
CCDC197-201ENST00000359253 LIFRP42702 1097 aa15.88■□□□□ 0.13
CCDC197-201ENST00000359253 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
CCDC197-201ENST00000359253 NBPF3Q9H094 633 aa15.88■□□□□ 0.13
CCDC197-201ENST00000359253 GPBP1L1Q9HC44 474 aaPredicted RBP15.88■□□□□ 0.13
CCDC197-201ENST00000359253 AATFQ9NY61 560 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC197-201ENST00000359253 ANGEL1Q9UNK9 670 aaKnown RBP15.88■□□□□ 0.13
CCDC197-201ENST00000359253 RIMBP2O15034 1052 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 LARGE1O95461 756 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 DYNLL1P63167 89 aaKnown RBP15.87■□□□□ 0.13
CCDC197-201ENST00000359253 GTF2IP78347 998 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 HMGN5P82970 282 aaKnown RBP15.87■□□□□ 0.13
CCDC197-201ENST00000359253 SLC51AQ86UW1 340 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 TBC1D10CQ8IV04 446 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 ESR2Q92731 530 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 DCP1AQ9NPI6 582 aaPredicted RBP15.87■□□□□ 0.13
CCDC197-201ENST00000359253 ATP6V1DQ9Y5K8 247 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 GAKO14976 1311 aa15.87■□□□□ 0.13
CCDC197-201ENST00000359253 VEGFAP15692 232 aaPredicted RBP15.86■□□□□ 0.13
CCDC197-201ENST00000359253 GJB2P29033 226 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 MMP14P50281 582 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 RCAN1P53805 252 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
CCDC197-201ENST00000359253 CXCL9Q07325 125 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 NBR1Q14596 966 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 STRIP1Q5VSL9 837 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 SDR42E1Q8WUS8 393 aa15.86■□□□□ 0.13
CCDC197-201ENST00000359253 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
CCDC197-201ENST00000359253 ERICH2A1L162 156 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
CCDC197-201ENST00000359253 USP5P45974 858 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 CIAPIN1Q6FI81 312 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 CTR9Q6PD62 1173 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 HHIPL2Q6UWX4 724 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
CCDC197-201ENST00000359253 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 MINDY4BA8MYZ0 360 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 B4E1Z4 1266 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 SH2B2O14492 632 aaPredicted RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 STX6O43752 255 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 ORC4O43929 436 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 ECE2O60344 883 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 DDNO94850 711 aaPredicted RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 VIL1P09327 827 aaKnown RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 ANTXR2P58335 489 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 CTDSPL2Q05D32 466 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 PDE4BQ07343 736 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 COL9A3Q14050 684 aaPredicted RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 PPP2R5BQ15173 497 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 SKOR2Q2VWA4 1001 aaPredicted RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 CCDC178Q5BJE1 867 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 NECAB1Q8N987 351 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 SMARCC2Q8TAQ2 1214 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 DPF2Q92785 391 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
CCDC197-201ENST00000359253 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
CCDC197-201ENST00000359253 YDJCA8MPS7 323 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 USP17L12C9JPN9 530 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 USP17L21D6R901 530 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 BAG4O95429 457 aaKnown RBP15.83■□□□□ 0.12
CCDC197-201ENST00000359253 SYT1P21579 422 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 RPS12P25398 132 aaKnown RBP15.83■□□□□ 0.12
CCDC197-201ENST00000359253 BTDP43251 543 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 ST3GAL1Q11201 340 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 SCRN1Q12765 414 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.12
CCDC197-201ENST00000359253 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 IGDCC4Q8TDY8 1250 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 LRRC2Q9BYS8 371 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 DBNDD1Q9H9R9 158 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 ZSWIM5Q9P217 1185 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 JAG2Q9Y219 1238 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 ZDHHC9Q9Y397 364 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 NEDD4P46934 1319 aa15.83■□□□□ 0.12
CCDC197-201ENST00000359253 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 USP17L3A6NCW0 530 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 USP17L4A6NCW7 530 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 IFIT3O14879 490 aaKnown RBP15.82■□□□□ 0.12
CCDC197-201ENST00000359253 KDM4AO75164 1064 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms