RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TMX1Q9H3N1 280 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 SLIT3O75094 1523 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 USP17L21D6R901 530 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 DEXIO95424 95 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 PPFIBP1Q86W92 1011 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.84□□□□□ -0.35
SSU72-202ENST00000359060 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 V9GYY5 206 aaPredicted RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
SSU72-202ENST00000359060 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
SSU72-202ENST00000359060 AK7Q96M32 723 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 NEDD4P46934 1319 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 CYP2D7A0A087X1C5 515 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 KCNQ2O43526 872 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 ERFEQ4G0M1 354 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 RPGRQ92834 1020 aaKnown RBP12.83□□□□□ -0.36
SSU72-202ENST00000359060 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 DCCP43146 1447 aa12.83□□□□□ -0.36
SSU72-202ENST00000359060 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
SSU72-202ENST00000359060 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
SSU72-202ENST00000359060 TNKSO95271 1327 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 STX17P56962 302 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 ANTXR2P58335 489 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 ZNF174Q15697 407 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 CCDC47Q96A33 483 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 XPO4Q9C0E2 1151 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 TOM1O60784 492 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 CMA1P23946 247 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 CDC27P30260 824 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 CBX1P83916 185 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
SSU72-202ENST00000359060 CCDC194A0A1B0GVG4 234 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 MYL5Q02045 173 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 SLC39A14Q15043 492 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 NOSTRINQ8IVI9 506 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
SSU72-202ENST00000359060 A0A1W2PQ27 194 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 A0A1W2PQ64 194 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 NLRP12P59046 1061 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
SSU72-202ENST00000359060 CUTAO60888 179 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
SSU72-202ENST00000359060 KIF5BP33176 963 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 KRT2P35908 639 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 FANCCQ00597 558 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 NR5A1Q13285 461 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 ARID5BQ14865 1188 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 SOGA3Q5TF21 947 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
SSU72-202ENST00000359060 KIF28PB7ZC32 967 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 URI1O94763 535 aaPredicted RBP12.81□□□□□ -0.36
SSU72-202ENST00000359060 TERF1P54274 439 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
SSU72-202ENST00000359060 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
SSU72-202ENST00000359060 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 CCP110O43303 1012 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
SSU72-202ENST00000359060 STAMQ92783 540 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 BAG3O95817 575 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 MCM7P33993 719 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 PTPN21Q16825 1174 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 AP5Z1O43299 807 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
SSU72-202ENST00000359060 FUCA2Q9BTY2 467 aa12.8□□□□□ -0.36
SSU72-202ENST00000359060 SRP68Q9UHB9 627 aaKnown RBP12.8□□□□□ -0.36
SSU72-202ENST00000359060 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
SSU72-202ENST00000359060 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
SSU72-202ENST00000359060 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 LDHBP07195 334 aaKnown RBP12.79□□□□□ -0.36
SSU72-202ENST00000359060 KANK3Q6NY19 840 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms