RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PDE4DQ08499 809 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 GPATCH11Q8N954 259 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 LSG1Q9H089 658 aaKnown RBP15.45■□□□□ 0.06
VCP-201ENST00000358901 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 C10orf67Q8IYJ2 551 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
VCP-201ENST00000358901 HMGB2P26583 209 aaKnown RBP15.45■□□□□ 0.06
VCP-201ENST00000358901 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
VCP-201ENST00000358901 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 CSGALNACT2Q8N6G5 542 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 ATP10AO60312 1499 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 ZNF804AQ7Z570 1209 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 TICAM2Q86XR7 235 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
VCP-201ENST00000358901 TLDC2A0PJX2 215 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 PDE8AO60658 829 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 LONRF3Q496Y0 759 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 HS2ST1Q7LGA3 356 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 PFKFB1P16118 471 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 PLCD1P51178 756 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 ST5P78524 1137 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 PNOCQ13519 176 aa15.44■□□□□ 0.06
VCP-201ENST00000358901 ZNF274Q96GC6 653 aaPredicted RBP15.44■□□□□ 0.06
VCP-201ENST00000358901 SPDYE3A6NKU9 549 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 NEBLO76041 1014 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 CFAP58Q5T655 872 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 LPIN2Q92539 896 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 ZNF215Q9UL58 517 aaPredicted RBP15.43■□□□□ 0.06
VCP-201ENST00000358901 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
VCP-201ENST00000358901 CUL4AQ13619 759 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 SV2BQ7L1I2 683 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 LMBR1Q8WVP7 490 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 MAP4K1Q92918 833 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 ZC3H12CQ9C0D7 883 aaKnown RBP15.43■□□□□ 0.06
VCP-201ENST00000358901 DENND2AQ9ULE3 1009 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 PAK1Q13153 545 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
VCP-201ENST00000358901 RGS22Q8NE09 1264 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 BICD1Q96G01 975 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 PLCG2P16885 1265 aa15.43■□□□□ 0.06
VCP-201ENST00000358901 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
VCP-201ENST00000358901 PFKFB2O60825 505 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 ERCC6LQ2NKX8 1250 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 CYP26C1Q6V0L0 522 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 OTUD6BQ8N6M0 293 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 MRVI1Q9Y6F6 885 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 KDM5AP29375 1690 aaKnown RBP15.42■□□□□ 0.06
VCP-201ENST00000358901 RAPGEF1Q13905 1077 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 GPIHBP1Q8IV16 184 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 FAM76AQ8TAV0 307 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 NYXQ9GZU5 481 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 PYCARDQ9ULZ3 195 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
VCP-201ENST00000358901 ERCC3P19447 782 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 TMTC1Q8IUR5 882 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 SLF1Q9BQI6 1058 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 SERTAD1Q9UHV2 236 aa15.42■□□□□ 0.06
VCP-201ENST00000358901 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 TRIM14Q14142 442 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 ARFGAP2Q8N6H7 521 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 PCDHA7Q9UN72 937 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 TRAF1Q13077 416 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 SAP30BPQ9UHR5 308 aaKnown RBP15.41■□□□□ 0.06
VCP-201ENST00000358901 RNASE9P60153 205 aaKnown RBP15.41■□□□□ 0.06
VCP-201ENST00000358901 FAM135BQ49AJ0 1406 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 DCAF17Q5H9S7 520 aaPredicted RBP15.41■□□□□ 0.06
VCP-201ENST00000358901 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
VCP-201ENST00000358901 LTKP29376 864 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 PRPHP41219 470 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TXKP42681 527 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 AKNAD1Q5T1N1 836 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 ANKRD2Q9GZV1 360 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 BTG4Q9NY30 223 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 FAM13AO94988 1023 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 FGAP02671 866 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TNNC1P63316 161 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 ZNF827Q17R98 1081 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 SPATA5Q8NB90 893 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 HAUS7Q99871 368 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TLR7Q9NYK1 1049 aaKnown RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 NRBP1Q9UHY1 535 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TMEM110-MUSTN1A8MSY1 372 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 HIBADHP31937 336 aaKnown RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 KRBA2Q6ZNG9 492 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 CMTR1Q8N1G2 835 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms