RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
PHTF1-201ENST00000357783 A0A1B0GUL6 1792 aa18.39■□□□□ 0.54
PHTF1-201ENST00000357783 SLC26A6Q9BXS9 759 aa18.39■□□□□ 0.53
PHTF1-201ENST00000357783 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-201ENST00000357783 STAG1Q8WVM7 1258 aa18.39■□□□□ 0.53
PHTF1-201ENST00000357783 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-201ENST00000357783 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-201ENST00000357783 PTF1AQ7RTS3 328 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 PKNOX2Q96KN3 472 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 ANO10Q9NW15 660 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 TRIM29Q14134 588 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 GNL3LQ9NVN8 582 aaKnown RBP18.38■□□□□ 0.53
PHTF1-201ENST00000357783 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 ZNF804BA4D1E1 1349 aa18.38■□□□□ 0.53
PHTF1-201ENST00000357783 COL1A1P02452 1464 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-201ENST00000357783 UQCRHLA0A096LP55 91 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 UQCRHP07919 91 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 BECN2A8MW95 431 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 SSRP1Q08945 709 aaKnown RBP18.37■□□□□ 0.53
PHTF1-201ENST00000357783 WTAPQ15007 396 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
PHTF1-201ENST00000357783 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
PHTF1-201ENST00000357783 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 MROH7-TTC4A0A0A0MT08 1334 aa18.37■□□□□ 0.53
PHTF1-201ENST00000357783 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 PPARAQ07869 468 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 UBE4AQ14139 1066 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 DHX40Q8IX18 779 aaKnown RBP18.36■□□□□ 0.53
PHTF1-201ENST00000357783 CEP57L1Q8IYX8 460 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 RGS22Q8NE09 1264 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 C8orf37Q96NL8 207 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 CLIP2Q9UDT6 1046 aa18.36■□□□□ 0.53
PHTF1-201ENST00000357783 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-201ENST00000357783 PFKFB1P16118 471 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 RTN1Q16799 776 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
PHTF1-201ENST00000357783 ERICH2A1L162 156 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 SMIM22K7EJ46 135 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 ZNF202O95125 648 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 LRMPQ12912 555 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-201ENST00000357783 BCL2L12Q9HB09 334 aa18.35■□□□□ 0.53
PHTF1-201ENST00000357783 STK36Q9NRP7 1315 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 CMA1P23946 247 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 AOPEPQ8N6M6 819 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 KIAA1468Q9P260 1216 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
PHTF1-201ENST00000357783 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 IFNAR1P17181 557 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
PHTF1-201ENST00000357783 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 NGLY1Q96IV0 654 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
PHTF1-201ENST00000357783 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
PHTF1-201ENST00000357783 KLRK1P26718 216 aa18.33■□□□□ 0.53
PHTF1-201ENST00000357783 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.53
PHTF1-201ENST00000357783 ZRSR1Q15695 479 aaKnown RBP18.33■□□□□ 0.53
PHTF1-201ENST00000357783 SARM1Q6SZW1 724 aa18.33■□□□□ 0.53
PHTF1-201ENST00000357783 FAM84BQ96KN1 310 aaPredicted RBP18.33■□□□□ 0.53
PHTF1-201ENST00000357783 UBAC1Q9BSL1 405 aa18.33■□□□□ 0.53
PHTF1-201ENST00000357783 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
PHTF1-201ENST00000357783 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHTF1-201ENST00000357783 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
PHTF1-201ENST00000357783 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
PHTF1-201ENST00000357783 MYH2Q9UKX2 1941 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 BIN1O00499 593 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 PTPAQ15257 358 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 TRIM22Q8IYM9 498 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 RIOK1Q9BRS2 568 aaKnown RBP18.32■□□□□ 0.52
PHTF1-201ENST00000357783 NID2Q14112 1375 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 CCDC144BQ3MJ40 725 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 WASF1Q92558 559 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 KCNJ14Q9UNX9 436 aa18.32■□□□□ 0.52
PHTF1-201ENST00000357783 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 GNPATO15228 680 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 CDC25BP30305 580 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 NBPF5PQ86XG9 351 aaPredicted RBP18.31■□□□□ 0.52
PHTF1-201ENST00000357783 CLIC6Q96NY7 704 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms