RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
USP6-202ENST00000357482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP6-202ENST00000357482 NEDD9Q14511 834 aa16.93■□□□□ 0.3
USP6-202ENST00000357482 MYD88Q99836 296 aa16.93■□□□□ 0.3
USP6-202ENST00000357482 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
USP6-202ENST00000357482 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 LRMPQ12912 555 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
USP6-202ENST00000357482 GBP6Q6ZN66 633 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 LARGE2Q8N3Y3 721 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
USP6-202ENST00000357482 LAMB2P55268 1798 aa16.91■□□□□ 0.3
USP6-202ENST00000357482 EFCAB8A8MWE9 144 aa16.91■□□□□ 0.3
USP6-202ENST00000357482 ARID4AP29374 1257 aaPredicted RBP16.91■□□□□ 0.3
USP6-202ENST00000357482 KCNJ6P48051 423 aa16.91■□□□□ 0.3
USP6-202ENST00000357482 LRRC8AQ8IWT6 810 aa16.91■□□□□ 0.3
USP6-202ENST00000357482 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
USP6-202ENST00000357482 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
USP6-202ENST00000357482 POTECB2RU33 542 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 BBOX1O75936 387 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 TBC1D8O95759 1140 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 CRYMQ14894 314 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 ZC3H12AQ5D1E8 599 aaKnown RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 TEX11Q8IYF3 940 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 CCAR2Q8N163 923 aaKnown RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 ERCC4Q92889 916 aaPredicted RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 ADCY2Q08462 1091 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 GRAPQ13588 217 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 TDRD7Q8NHU6 1098 aaKnown RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
USP6-202ENST00000357482 FAXDC2Q96IV6 333 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 ARFGAP3Q9NP61 516 aa16.9■□□□□ 0.3
USP6-202ENST00000357482 CCP110O43303 1012 aa16.89■□□□□ 0.29
USP6-202ENST00000357482 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
USP6-202ENST00000357482 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
USP6-202ENST00000357482 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
USP6-202ENST00000357482 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
USP6-202ENST00000357482 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
USP6-202ENST00000357482 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
USP6-202ENST00000357482 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 ERLIN2O94905 339 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 ELF1P32519 619 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 ICA1Q05084 483 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 AP1ARQ63HQ0 302 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 CC2D1AQ6P1N0 951 aaPredicted RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 DPP8Q6V1X1 898 aaPredicted RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 GPR161Q8N6U8 529 aaKnown RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 BORCS6Q96GS4 357 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 SH3GL3Q99963 347 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 METTL22Q9BUU2 404 aaPredicted RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 ETAA1Q9NY74 926 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 GJA3Q9Y6H8 435 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 HNRNPH1P31943 449 aaKnown RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 SP8Q8IXZ3 490 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 ZBTB38Q8NAP3 1195 aaPredicted RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
USP6-202ENST00000357482 TAOK2Q9UL54 1235 aa16.88■□□□□ 0.29
USP6-202ENST00000357482 FZD9O00144 591 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 MAFGO15525 162 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 ANAPC15P60006 121 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 HTRA3P83110 453 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 TRAF1Q13077 416 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 SNW1Q13573 536 aaKnown RBP16.87■□□□□ 0.29
USP6-202ENST00000357482 AOC3Q16853 763 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 SARM1Q6SZW1 724 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 G2E3Q7L622 706 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
USP6-202ENST00000357482 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
USP6-202ENST00000357482 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
USP6-202ENST00000357482 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
USP6-202ENST00000357482 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
USP6-202ENST00000357482 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
USP6-202ENST00000357482 SKILP12757 684 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 GSDMDP57764 484 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
USP6-202ENST00000357482 GPC2Q8N158 579 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms