RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 TDO2P48775 406 aa28.93■■■□□ 2.22
HDGF-201ENST00000357325 SDR42E1Q8WUS8 393 aa28.93■■■□□ 2.22
HDGF-201ENST00000357325 SLC3A2P08195 630 aaKnown RBP28.93■■■□□ 2.22
HDGF-201ENST00000357325 CMA1P23946 247 aa28.93■■■□□ 2.22
HDGF-201ENST00000357325 CDKL5O76039 1030 aa28.92■■■□□ 2.22
HDGF-201ENST00000357325 MFSD6Q6ZSS7 791 aa28.92■■■□□ 2.22
HDGF-201ENST00000357325 LRP2BPQ9P2M1 347 aa28.92■■■□□ 2.22
HDGF-201ENST00000357325 TAF1P21675 1872 aa28.92■■■□□ 2.22
HDGF-201ENST00000357325 PHLPP1O60346 1717 aa28.92■■■□□ 2.22
HDGF-201ENST00000357325 USP27XA6NNY8 438 aa28.91■■■□□ 2.22
HDGF-201ENST00000357325 GYG1P46976 350 aa28.91■■■□□ 2.22
HDGF-201ENST00000357325 GNL2Q13823 731 aaKnown RBP28.91■■■□□ 2.22
HDGF-201ENST00000357325 NBPF11Q86T75 865 aa28.91■■■□□ 2.22
HDGF-201ENST00000357325 KCNJ14Q9UNX9 436 aa28.91■■■□□ 2.22
HDGF-201ENST00000357325 CCDC69A6NI79 296 aa28.91■■■□□ 2.22
HDGF-201ENST00000357325 GTF2F1P35269 517 aaKnown RBP eCLIP28.91■■■□□ 2.222e-8■■■■□ 25.3
HDGF-201ENST00000357325 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.91■■■□□ 2.22
HDGF-201ENST00000357325 CHD4Q14839 1912 aa28.9■■■□□ 2.22
HDGF-201ENST00000357325 LIFRP42702 1097 aa28.9■■■□□ 2.22
HDGF-201ENST00000357325 ABCF2Q9UG63 623 aa28.9■■■□□ 2.22
HDGF-201ENST00000357325 SPECC1Q5M775 1068 aa28.9■■■□□ 2.22
HDGF-201ENST00000357325 CPLX2Q6PUV4 134 aaKnown RBP28.89■■■□□ 2.22
HDGF-201ENST00000357325 BTBD18B2RXH4 712 aa28.89■■■□□ 2.21
HDGF-201ENST00000357325 U2AF2P26368 475 aaKnown RBP eCLIP28.89■■■□□ 2.21
HDGF-201ENST00000357325 PARP10Q53GL7 1025 aa28.89■■■□□ 2.21
HDGF-201ENST00000357325 ERFEQ4G0M1 354 aa28.88■■■□□ 2.21
HDGF-201ENST00000357325 BCL9LQ86UU0 1499 aa28.88■■■□□ 2.21
HDGF-201ENST00000357325 NUTM2BA6NNL0 878 aaPredicted RBP28.88■■■□□ 2.21
HDGF-201ENST00000357325 NUTM2EB1AL46 878 aaPredicted RBP28.88■■■□□ 2.21
HDGF-201ENST00000357325 CYP7A1P22680 504 aa28.88■■■□□ 2.21
HDGF-201ENST00000357325 SSRP1Q08945 709 aaKnown RBP28.88■■■□□ 2.21
HDGF-201ENST00000357325 NUTM2AQ8IVF1 878 aaPredicted RBP28.88■■■□□ 2.21
HDGF-201ENST00000357325 SYKP43405 635 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 NCAPHQ15003 741 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 STAG1Q8WVM7 1258 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 NAT10Q9H0A0 1025 aaKnown RBP28.87■■■□□ 2.21
HDGF-201ENST00000357325 HPSEQ9Y251 543 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 FMNL1O95466 1100 aaPredicted RBP28.87■■■□□ 2.21
HDGF-201ENST00000357325 GRIN1Q05586 938 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 PNOCQ13519 176 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 UBE2Q2Q8WVN8 375 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 BCL2L12Q9HB09 334 aa28.87■■■□□ 2.21
HDGF-201ENST00000357325 COL1A1P02452 1464 aaPredicted RBP28.86■■■□□ 2.21
HDGF-201ENST00000357325 PNPLA7Q6ZV29 1317 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 MINDY4BA8MYZ0 360 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 CYP2D7A0A087X1C5 515 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 TOB1P50616 345 aaPredicted RBP28.86■■■□□ 2.21
HDGF-201ENST00000357325 NLRP12P59046 1061 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 CCZ1BP86790 482 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 CCZ1P86791 482 aaPredicted RBP28.86■■■□□ 2.21
HDGF-201ENST00000357325 BICDL1Q6ZP65 573 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 KRT23Q9C075 422 aa28.86■■■□□ 2.21
HDGF-201ENST00000357325 TRIM29Q14134 588 aa28.85■■■□□ 2.21
HDGF-201ENST00000357325 WTAPQ15007 396 aa28.85■■■□□ 2.21
HDGF-201ENST00000357325 NUP133Q8WUM0 1156 aa28.85■■■□□ 2.21
HDGF-201ENST00000357325 XPO4Q9C0E2 1151 aaKnown RBP28.85■■■□□ 2.21
HDGF-201ENST00000357325 CNNM2Q9H8M5 875 aa28.85■■■□□ 2.21
HDGF-201ENST00000357325 BCORQ6W2J9 1755 aa28.85■■■□□ 2.21
HDGF-201ENST00000357325 IFNAR1P17181 557 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 EVX2Q03828 476 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 ZRSR1Q15695 479 aaKnown RBP28.84■■■□□ 2.21
HDGF-201ENST00000357325 IFNKQ9P0W0 207 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 TIAM2Q8IVF5 1701 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 COL22A1Q8NFW1 1626 aaPredicted RBP28.84■■■□□ 2.21
HDGF-201ENST00000357325 FOXN1O15353 648 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 PPP6R2O75170 966 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 SKILP12757 684 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 TNNT1P13805 278 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 PPARAQ07869 468 aa28.84■■■□□ 2.21
HDGF-201ENST00000357325 DYNLL1P63167 89 aaKnown RBP28.83■■■□□ 2.21
HDGF-201ENST00000357325 NR5A1Q13285 461 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 RTN1Q16799 776 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 TPD52L1Q16890 204 aaPredicted RBP28.83■■■□□ 2.21
HDGF-201ENST00000357325 LONRF3Q496Y0 759 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 FOXP4Q8IVH2 680 aaPredicted RBP28.83■■■□□ 2.21
HDGF-201ENST00000357325 NACAP1Q9BZK3 213 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 BCL11BQ9C0K0 894 aaPredicted RBP28.83■■■□□ 2.21
HDGF-201ENST00000357325 HSD3B7Q9H2F3 369 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 RAI14Q9P0K7 980 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 PTF1AQ7RTS3 328 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 SHISA4Q96DD7 197 aa28.83■■■□□ 2.21
HDGF-201ENST00000357325 SMC2O95347 1197 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 ATP1A3P13637 1013 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 LMOD1P29536 600 aaPredicted RBP28.82■■■□□ 2.2
HDGF-201ENST00000357325 RESP18Q5W5W9 173 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 DIS3L2Q8IYB7 885 aaKnown RBP28.82■■■□□ 2.2
HDGF-201ENST00000357325 OXER1Q8TDS5 423 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 ZNF384Q8TF68 577 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 KLRK1P26718 216 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 RBM6P78332 1123 aaKnown RBP28.82■■■□□ 2.2
HDGF-201ENST00000357325 CHAF1AQ13111 956 aaPredicted RBP28.82■■■□□ 2.2
HDGF-201ENST00000357325 METTL16Q86W50 562 aaKnown RBP28.82■■■□□ 2.2
HDGF-201ENST00000357325 NOSTRINQ8IVI9 506 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 LINC00116Q8NCU8 138 aa28.82■■■□□ 2.2
HDGF-201ENST00000357325 RTL9Q8NET4 1388 aa28.81■■■□□ 2.2
HDGF-201ENST00000357325 MMP1P03956 469 aa28.81■■■□□ 2.2
HDGF-201ENST00000357325 TRMT1Q9NXH9 659 aaKnown RBP28.81■■■□□ 2.2
HDGF-201ENST00000357325 hCG_1642624A0A1W2PR95 340 aa28.81■■■□□ 2.2
HDGF-201ENST00000357325 PRKCSHP14314 528 aaPredicted RBP28.81■■■□□ 2.2
HDGF-201ENST00000357325 GNAT2P19087 354 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms