RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HDXQ7Z353 690 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 LPIN2Q92539 896 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 GUCA1BQ9UMX6 200 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 ABCC4O15439 1325 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 EBAG9O00559 213 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 CROCCP2Q86T23 111 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 ATP5JP18859 108 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 ERBB4Q15303 1308 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 KIF1BO60333 1816 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 F8W031 263 aaPredicted RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 ITGA6P23229 1130 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 PICALMQ13492 652 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 GCKRQ14397 625 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 MROH5Q6ZUA9 1318 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 RXRAP19793 462 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 STX17P56962 302 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 CLUL1Q15846 466 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 KIAA1524Q8TCG1 905 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 XAGE2Q96GT9 111 aa13.19□□□□□ -0.3
COL9A1-202ENST00000357250 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
COL9A1-202ENST00000357250 GPAA1O43292 621 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 EPB41P11171 864 aaKnown RBP13.18□□□□□ -0.3
COL9A1-202ENST00000357250 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
COL9A1-202ENST00000357250 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
COL9A1-202ENST00000357250 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
COL9A1-202ENST00000357250 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 CAPN2P17655 700 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 NLRP12P59046 1061 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
COL9A1-202ENST00000357250 DIS3L2Q8IYB7 885 aaKnown RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 FRMD4BQ9Y2L6 1034 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 USP6P35125 1406 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 B4E1Z4 1266 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 BRD1O95696 1058 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 PHKG2P15735 406 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 ZNF75DP51815 510 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
COL9A1-202ENST00000357250 PABPN1LA6NDY0 278 aaKnown RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL9A1-202ENST00000357250 SYNMO15061 1565 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 ATP5DP30049 168 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 FAM135BQ49AJ0 1406 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 TRAF5O00463 557 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 TAF5LO75529 589 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 FANCCQ00597 558 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
COL9A1-202ENST00000357250 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CETN3O15182 167 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CCDC97Q96F63 343 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-202ENST00000357250 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 COMMD10Q9Y6G5 202 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
COL9A1-202ENST00000357250 TET3O43151 1660 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms