RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ATP8A2Q9NTI2 1148 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 FOSBP53539 338 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 GSTO1P78417 241 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 SART3Q15020 963 aaKnown RBP30.1■■■□□ 2.41
CLK2-201ENST00000355560 DIXDC1Q155Q3 683 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 FAM173BQ6P4H8 233 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 OLFM4Q6UX06 510 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 MICU3Q86XE3 530 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 LAMB1P07942 1786 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 USP17L12C9JPN9 530 aa30.09■■■□□ 2.41
CLK2-201ENST00000355560 USP17L21D6R901 530 aa30.09■■■□□ 2.41
CLK2-201ENST00000355560 FDPSP14324 419 aaKnown RBP30.09■■■□□ 2.41
CLK2-201ENST00000355560 FBXO41Q8TF61 875 aa30.09■■■□□ 2.41
CLK2-201ENST00000355560 ZKSCAN3Q9BRR0 538 aa30.09■■■□□ 2.41
CLK2-201ENST00000355560 RXRAP19793 462 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 KRT85P78386 507 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 CSPP1Q1MSJ5 1256 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 RBM27Q9P2N5 1060 aaKnown RBP30.08■■■□□ 2.41
CLK2-201ENST00000355560 ZBTB43O43298 467 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 ESR2Q92731 530 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 MYH2Q9UKX2 1941 aa30.08■■■□□ 2.41
CLK2-201ENST00000355560 RESTQ13127 1097 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 MPNDQ8N594 471 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 QSER1Q2KHR3 1735 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 CCDC69A6NI79 296 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 ZNF622Q969S3 477 aaKnown RBP eCLIP30.07■■■□□ 2.46e-7■■□□□ 13.2
CLK2-201ENST00000355560 MTA3Q9BTC8 594 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 SLC12A7Q9Y666 1083 aa30.07■■■□□ 2.4
CLK2-201ENST00000355560 ERICH2A1L162 156 aa30.06■■■□□ 2.4
CLK2-201ENST00000355560 RIMBP2O15034 1052 aa30.06■■■□□ 2.4
CLK2-201ENST00000355560 ZSCAN23Q3MJ62 389 aa30.06■■■□□ 2.4
CLK2-201ENST00000355560 MFSD14BQ5SR56 506 aa30.06■■■□□ 2.4
CLK2-201ENST00000355560 TMEM63CQ9P1W3 806 aa30.06■■■□□ 2.4
CLK2-201ENST00000355560 ARPP21Q9UBL0 812 aaPredicted RBP30.06■■■□□ 2.4
CLK2-201ENST00000355560 WTAPQ15007 396 aa30.05■■■□□ 2.4
CLK2-201ENST00000355560 L1TD1Q5T7N2 865 aaKnown RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 DPP8Q6V1X1 898 aaPredicted RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 UBAC1Q9BSL1 405 aa30.05■■■□□ 2.4
CLK2-201ENST00000355560 MYL10Q9BUA6 226 aa30.05■■■□□ 2.4
CLK2-201ENST00000355560 TMX4Q9H1E5 349 aaPredicted RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 ZSCAN16Q9H4T2 348 aaPredicted RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 MROH7-TTC4A0A0A0MT08 1334 aa30.05■■■□□ 2.4
CLK2-201ENST00000355560 PCP11498 1178 aaKnown RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 C2CD5Q86YS7 1000 aa30.05■■■□□ 2.4
CLK2-201ENST00000355560 ORC3Q9UBD5 711 aaPredicted RBP30.05■■■□□ 2.4
CLK2-201ENST00000355560 BAG3O95817 575 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 LDHCP07864 332 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 ADD1P35611 737 aaKnown RBP30.04■■■□□ 2.4
CLK2-201ENST00000355560 UBE2HP62256 183 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 CCDC144CPQ8IYA2 1237 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 TBC1D22AQ8WUA7 517 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 NOL10Q9BSC4 688 aaKnown RBP30.04■■■□□ 2.4
CLK2-201ENST00000355560 ISY1Q9ULR0 285 aaKnown RBP30.04■■■□□ 2.4
CLK2-201ENST00000355560 GOLGA8AA7E2F4 631 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 SH3RF3Q8TEJ3 882 aaPredicted RBP30.04■■■□□ 2.4
CLK2-201ENST00000355560 COA1Q9GZY4 146 aa30.04■■■□□ 2.4
CLK2-201ENST00000355560 FGRP09769 529 aa30.03■■■□□ 2.4
CLK2-201ENST00000355560 CDC27P30260 824 aa30.03■■■□□ 2.4
CLK2-201ENST00000355560 EVX2Q03828 476 aa30.03■■■□□ 2.4
CLK2-201ENST00000355560 ZC3H12CQ9C0D7 883 aaKnown RBP30.03■■■□□ 2.4
CLK2-201ENST00000355560 PRDM1O75626 825 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 GAS2L3Q86XJ1 694 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 RTFDC1Q9BY42 306 aaPredicted RBP30.02■■■□□ 2.4
CLK2-201ENST00000355560 MCM9Q9NXL9 1143 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 H0YIN7 160 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 CDKL5O76039 1030 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 USP5P45974 858 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 GUCY1B3Q02153 619 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 SBK1Q52WX2 424 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 SYNE3Q6ZMZ3 975 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 TNKSO95271 1327 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 FAM205AQ6ZU69 1335 aa30.02■■■□□ 2.4
CLK2-201ENST00000355560 RANBP6O60518 1105 aaKnown RBP30.01■■■□□ 2.39
CLK2-201ENST00000355560 PPP4CP60510 307 aa30.01■■■□□ 2.39
CLK2-201ENST00000355560 CPLX2Q6PUV4 134 aaKnown RBP30.01■■■□□ 2.39
CLK2-201ENST00000355560 CYP2D6P10635 497 aa30.01■■■□□ 2.39
CLK2-201ENST00000355560 GTF2IP78347 998 aa30.01■■■□□ 2.39
CLK2-201ENST00000355560 SF3B2Q13435 895 aaKnown RBP30.01■■■□□ 2.39
CLK2-201ENST00000355560 TTC6Q86TZ1 520 aa30.01■■■□□ 2.39
CLK2-201ENST00000355560 TMTC2Q8N394 836 aa30.01■■■□□ 2.39
CLK2-201ENST00000355560 ZNF445P59923 1031 aa30■■■□□ 2.39
CLK2-201ENST00000355560 TPRNQ4KMQ1 711 aa30■■■□□ 2.39
CLK2-201ENST00000355560 C8orf76Q96K31 380 aa30■■■□□ 2.39
CLK2-201ENST00000355560 MKRN1Q9UHC7 482 aaKnown RBP30■■■□□ 2.39
CLK2-201ENST00000355560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30■■■□□ 2.39
CLK2-201ENST00000355560 MYH15Q9Y2K3 1946 aa30■■■□□ 2.39
CLK2-201ENST00000355560 SLC3A2P08195 630 aaKnown RBP29.99■■■□□ 2.39
CLK2-201ENST00000355560 BAG6P46379 1132 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 STYK1Q6J9G0 422 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 SCAND2PQ9GZW5 306 aaPredicted RBP29.99■■■□□ 2.39
CLK2-201ENST00000355560 FAM217BQ9NTX9 383 aaPredicted RBP29.99■■■□□ 2.39
CLK2-201ENST00000355560 NID2Q14112 1375 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 USP17L8P0C7I0 530 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 BTDP43251 543 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 NAV1Q8NEY1 1877 aa29.99■■■□□ 2.39
CLK2-201ENST00000355560 TFIP11Q9UBB9 837 aaKnown RBP29.99■■■□□ 2.39
CLK2-201ENST00000355560 ELP1O95163 1332 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 SEC23AQ15436 765 aa29.98■■■□□ 2.39
CLK2-201ENST00000355560 SYAP1Q96A49 352 aaPredicted RBP29.98■■■□□ 2.39
CLK2-201ENST00000355560 ZSCAN10Q96SZ4 725 aaPredicted RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms