RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SYNE3Q6ZMZ3 975 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 NKX2-3Q8TAU0 364 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 ZNF274Q96GC6 653 aaPredicted RBP10.75□□□□□ -0.69
SMG6-202ENST00000354901 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 ACTN2P35609 894 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 GOLGA8FQ08AF8 430 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 GOLGA8DPQ0D2H9 430 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 HLFQ16534 295 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 SLC9C2Q5TAH2 1124 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 MICU3Q86XE3 530 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
SMG6-202ENST00000354901 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 UBR2Q8IWV8 1755 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 RFX7Q2KHR2 1363 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 LIG3P49916 1009 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 PHKBQ93100 1093 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 GREM2Q9H772 168 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 ARFGAP3Q9NP61 516 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 FAM53CQ9NYF3 392 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 LRP6O75581 1613 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 NCOA7Q8NI08 942 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 PPP1R13BQ96KQ4 1090 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 AKAP2Q9Y2D5 859 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 KIF28PB7ZC32 967 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 H3BQF6 201 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 ITGA6P23229 1130 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 MCAMP43121 646 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 ANTXR2P58335 489 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 TRDNQ13061 729 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 DPCR1Q3MIW9 517 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 ENGASEQ8NFI3 743 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 APPBP2Q92624 585 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 AGXT2Q9BYV1 514 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 PDE11AQ9HCR9 933 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 PHLPP1O60346 1717 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 SPTLC2O15270 562 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 CTAGE5O15320 804 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 MAGEA9P43362 315 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
SMG6-202ENST00000354901 SALL1Q9NSC2 1324 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 B4E1Z4 1266 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 NRDCO43847 1150 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 CCZ1BP86790 482 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 CCZ1P86791 482 aaPredicted RBP10.73□□□□□ -0.69
SMG6-202ENST00000354901 NFXL1Q6ZNB6 911 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
SMG6-202ENST00000354901 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
SMG6-202ENST00000354901 LINC00301Q8NCQ3 95 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 ISCA1Q9BUE6 129 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 COL16A1Q07092 1604 aaPredicted RBP10.73□□□□□ -0.69
SMG6-202ENST00000354901 CIAO1O76071 339 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 TBC1D8O95759 1140 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 SFPQP23246 707 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMG6-202ENST00000354901 LRRFIP1Q32MZ4 808 aaKnown RBP10.73□□□□□ -0.69
SMG6-202ENST00000354901 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 HPS5Q9UPZ3 1129 aa10.73□□□□□ -0.69
SMG6-202ENST00000354901 LAMA4Q16363 1823 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 N4BP1O75113 896 aaKnown RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 REXO1L1PQ8IX06 675 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 MB21D2Q8IYB1 491 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 FMR1NBQ8N0W7 255 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 TRMT112Q9UI30 125 aaKnown RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 FAN1Q9Y2M0 1017 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 PHKA1P46020 1223 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 HSP90AA4PQ58FG1 418 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 LMOD1P29536 600 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 TBC1D10CQ8IV04 446 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 PIGBQ92521 554 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 ALG1Q9BT22 464 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
SMG6-202ENST00000354901 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
SMG6-202ENST00000354901 ZNF202O95125 648 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 SLC3A2P08195 630 aaKnown RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 SPECC1Q5M775 1068 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 E4F1Q66K89 784 aaPredicted RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 MCTP2Q6DN12 878 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 CC2D1AQ6P1N0 951 aaPredicted RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 CYB5R4Q7L1T6 521 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 PIH1D3Q9NQM4 214 aaKnown RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 RTEL1Q9NZ71 1219 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 IFNKQ9P0W0 207 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms