RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FOXN1O15353 648 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 LONRF3Q496Y0 759 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 ARMCX5Q6P1M9 558 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 ANKRD7Q92527 254 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.21
COL13A1-201ENST00000354547 LRP2BPQ9P2M1 347 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 MYH7P12883 1935 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 NCAPHQ15003 741 aa22.58■■□□□ 1.21
COL13A1-201ENST00000354547 ZNF512BQ96KM6 892 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-201ENST00000354547 SMIM22K7EJ46 135 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 FANCCQ00597 558 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 GOLGA8FQ08AF8 430 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 GOLGA8DPQ0D2H9 430 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 PTPAQ15257 358 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 JMYQ8N9B5 988 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 ABCF2Q9UG63 623 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 GSG1L2A8MUP6 293 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 MINDY4BA8MYZ0 360 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 SERPINC1P01008 464 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 SFPQP23246 707 aaKnown RBP eCLIP22.57■■□□□ 1.2
COL13A1-201ENST00000354547 GSDMDP57764 484 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 AKNAD1Q5T1N1 836 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 MAP3K14Q99558 947 aa22.57■■□□□ 1.2
COL13A1-201ENST00000354547 MROH5Q6ZUA9 1318 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 FGFR2P21802 821 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 DPF2Q92785 391 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 WTIPA6NIX2 430 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-201ENST00000354547 GRIN1Q05586 938 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 ZNF34Q8IZ26 560 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 PDILTQ8N807 584 aa22.56■■□□□ 1.2
COL13A1-201ENST00000354547 ZNF215Q9UL58 517 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-201ENST00000354547 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
COL13A1-201ENST00000354547 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 hCG_1642624A0A1W2PR95 340 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 CFAP100Q494V2 611 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 KCNH3Q9ULD8 1083 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 NR5A1Q13285 461 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 NYAP1Q6ZVC0 841 aa22.55■■□□□ 1.2
COL13A1-201ENST00000354547 DIS3L2Q8IYB7 885 aaKnown RBP22.55■■□□□ 1.2
COL13A1-201ENST00000354547 BCL9O00512 1426 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-201ENST00000354547 WTAPQ15007 396 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 METTL16Q86W50 562 aaKnown RBP22.54■■□□□ 1.2
COL13A1-201ENST00000354547 UBASH3AP57075 661 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 RTN1Q16799 776 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 E4F1Q66K89 784 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-201ENST00000354547 SGMS1Q86VZ5 419 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-201ENST00000354547 OSBPL5Q9H0X9 879 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-201ENST00000354547 PCDHA5Q9Y5H7 936 aa22.54■■□□□ 1.2
COL13A1-201ENST00000354547 PPP6R2O75170 966 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 BPIFA3Q9BQP9 254 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 HPSEQ9Y251 543 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 ATP6V1AP38606 617 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 SAFBQ15424 915 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL13A1-201ENST00000354547 RESP18Q5W5W9 173 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 NOSTRINQ8IVI9 506 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 GRAMD1CQ8IYS0 662 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 UTP14AQ9BVJ6 771 aaKnown RBP22.53■■□□□ 1.2
COL13A1-201ENST00000354547 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
COL13A1-201ENST00000354547 ERICH2A1L162 156 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 ZNF827Q17R98 1081 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 FANCLQ9NW38 375 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 ERVV-1B6SEH8 477 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 TRIM22Q8IYM9 498 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 KIF18AQ8NI77 898 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 HSD3B7Q9H2F3 369 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 IMPACTQ9P2X3 320 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL13A1-201ENST00000354547 ATRNO75882 1429 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 C4AP0C0L4 1744 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 C4BP0C0L5 1744 aa22.52■■□□□ 1.2
COL13A1-201ENST00000354547 CYP7A1P22680 504 aa22.52■■□□□ 1.19
COL13A1-201ENST00000354547 IGHMBP2P38935 993 aaKnown RBP22.52■■□□□ 1.19
COL13A1-201ENST00000354547 LIFRP42702 1097 aa22.52■■□□□ 1.19
COL13A1-201ENST00000354547 SYT10Q6XYQ8 523 aa22.52■■□□□ 1.19
COL13A1-201ENST00000354547 KRT23Q9C075 422 aa22.52■■□□□ 1.19
COL13A1-201ENST00000354547 TMEM232C9JQI7 657 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-201ENST00000354547 SART3Q15020 963 aaKnown RBP22.51■■□□□ 1.19
COL13A1-201ENST00000354547 KRBA2Q6ZNG9 492 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 KRI1Q8N9T8 703 aaKnown RBP22.51■■□□□ 1.19
COL13A1-201ENST00000354547 OXER1Q8TDS5 423 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 IGSF3O75054 1194 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 TOB1P50616 345 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-201ENST00000354547 MYL5Q02045 173 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 PDE4BQ07343 736 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 ALX1Q15699 326 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 HOMER1Q86YM7 354 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 RAI14Q9P0K7 980 aa22.51■■□□□ 1.19
COL13A1-201ENST00000354547 POLR2DO15514 142 aaKnown RBP22.5■■□□□ 1.19
COL13A1-201ENST00000354547 ADGRA1Q86SQ6 560 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 PPP1R13BQ96KQ4 1090 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 CNNM2Q9H8M5 875 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 TUBE1Q9UJT0 475 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 PCDHB6Q9Y5E3 794 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 CUTAO60888 179 aa22.5■■□□□ 1.19
COL13A1-201ENST00000354547 CRKLP46109 303 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms