RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 USP17L4A6NCW7 530 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 RAB3GAP1Q15042 981 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 USP17L1Q7RTZ2 530 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 ZNF277Q9NRM2 450 aaPredicted RBP24.22■■□□□ 1.47
TRIM4-202ENST00000354241 MCM9Q9NXL9 1143 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 ARPP21Q9UBL0 812 aaPredicted RBP24.22■■□□□ 1.47
TRIM4-202ENST00000354241 DAGLAQ9Y4D2 1042 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 ADAMTSL1Q8N6G6 1762 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 SMIM22K7EJ46 135 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 KDM4AO75164 1064 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 PLCG2P16885 1265 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 NUCB2P80303 420 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 FBXL16Q8N461 479 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 TGFBRAP1Q8WUH2 860 aa24.22■■□□□ 1.47
TRIM4-202ENST00000354241 SCNN1DP51172 638 aa24.21■■□□□ 1.47
TRIM4-202ENST00000354241 NFKBIBQ15653 356 aa24.21■■□□□ 1.47
TRIM4-202ENST00000354241 DACT2Q5SW24 774 aa24.21■■□□□ 1.47
TRIM4-202ENST00000354241 FKBP1AP62942 108 aaKnown RBP24.2■■□□□ 1.46
TRIM4-202ENST00000354241 LARGE2Q8N3Y3 721 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 CYP2D6P10635 497 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 PKP1Q13835 747 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 SBK1Q52WX2 424 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 MAPKAPK5Q8IW41 473 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 GTF3C6Q969F1 213 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 ZSWIM5Q9P217 1185 aa24.2■■□□□ 1.46
TRIM4-202ENST00000354241 PSME4Q14997 1843 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 YDJCA8MPS7 323 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 DTNBO60941 627 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 USP17L8P0C7I0 530 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 SLC4A8Q2Y0W8 1093 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 KIAA0825Q8IV33 1275 aa24.19■■□□□ 1.46
TRIM4-202ENST00000354241 MKRN1Q9UHC7 482 aaKnown RBP24.19■■□□□ 1.46
TRIM4-202ENST00000354241 RHBDL3P58872 404 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 EVX2Q03828 476 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 TNPO1Q92973 898 aaKnown RBP24.18■■□□□ 1.46
TRIM4-202ENST00000354241 FOCADQ5VW36 1801 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 FER1L6Q2WGJ9 1857 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 SH2B2O14492 632 aaPredicted RBP24.18■■□□□ 1.46
TRIM4-202ENST00000354241 PFKFB2O60825 505 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 GJB2P29033 226 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 TEKT1Q969V4 418 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 ZNF274Q96GC6 653 aaPredicted RBP24.18■■□□□ 1.46
TRIM4-202ENST00000354241 TMEM87BQ96K49 555 aa24.18■■□□□ 1.46
TRIM4-202ENST00000354241 ANGEL1Q9UNK9 670 aaKnown RBP24.18■■□□□ 1.46
TRIM4-202ENST00000354241 SLC3A2P08195 630 aaKnown RBP24.17■■□□□ 1.46
TRIM4-202ENST00000354241 SCRN1Q12765 414 aa24.17■■□□□ 1.46
TRIM4-202ENST00000354241 BCS1LQ9Y276 419 aa24.17■■□□□ 1.46
TRIM4-202ENST00000354241 MYH1P12882 1939 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 KLF18A0A0U1RQI7 1052 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 PDIA3P30101 505 aaKnown RBP24.16■■□□□ 1.46
TRIM4-202ENST00000354241 HHIPL2Q6UWX4 724 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 ESR2Q92731 530 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 VPS33BQ9H267 617 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 SAP30BPQ9UHR5 308 aaKnown RBP24.16■■□□□ 1.46
TRIM4-202ENST00000354241 BRPF3Q9ULD4 1205 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 IFIT3O14879 490 aaKnown RBP24.16■■□□□ 1.46
TRIM4-202ENST00000354241 CRKP46108 304 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 EVCP57679 992 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 CCT2P78371 535 aaKnown RBP24.16■■□□□ 1.46
TRIM4-202ENST00000354241 TMEM67Q5HYA8 995 aa24.16■■□□□ 1.46
TRIM4-202ENST00000354241 COL4A5P29400 1685 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 DDX60LQ5H9U9 1706 aaKnown RBP24.15■■□□□ 1.46
TRIM4-202ENST00000354241 FLT1P17948 1338 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 PRDM1O75626 825 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 PCP11498 1178 aaKnown RBP24.15■■□□□ 1.46
TRIM4-202ENST00000354241 IARSP41252 1262 aaKnown RBP24.15■■□□□ 1.46
TRIM4-202ENST00000354241 C12orf60Q5U649 245 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 IGDCC4Q8TDY8 1250 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 ZKSCAN3Q9BRR0 538 aa24.15■■□□□ 1.46
TRIM4-202ENST00000354241 POLR3DP05423 398 aaPredicted RBP24.14■■□□□ 1.46
TRIM4-202ENST00000354241 TAOK3Q9H2K8 898 aa24.14■■□□□ 1.46
TRIM4-202ENST00000354241 ECM29Q5VYK3 1845 aa24.14■■□□□ 1.46
TRIM4-202ENST00000354241 GOLGA8BA8MQT2 603 aa24.14■■□□□ 1.45
TRIM4-202ENST00000354241 SART3Q15020 963 aaKnown RBP24.14■■□□□ 1.45
TRIM4-202ENST00000354241 NIM1KQ8IY84 436 aa24.14■■□□□ 1.45
TRIM4-202ENST00000354241 ZDHHC9Q9Y397 364 aa24.14■■□□□ 1.45
TRIM4-202ENST00000354241 RANBP6O60518 1105 aaKnown RBP24.13■■□□□ 1.45
TRIM4-202ENST00000354241 FGRP09769 529 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 PDE4BQ07343 736 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 FOXD4L5Q5VV16 416 aaPredicted RBP24.13■■□□□ 1.45
TRIM4-202ENST00000354241 NFXL1Q6ZNB6 911 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 FOXD4L4Q8WXT5 416 aaPredicted RBP24.13■■□□□ 1.45
TRIM4-202ENST00000354241 LY9Q9HBG7 655 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 SPON1Q9HCB6 807 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 NCOA5Q9HCD5 579 aaKnown RBP24.13■■□□□ 1.45
TRIM4-202ENST00000354241 USP40Q9NVE5 1235 aa24.13■■□□□ 1.45
TRIM4-202ENST00000354241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.13■■□□□ 1.45
TRIM4-202ENST00000354241 ERICH2A1L162 156 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 RAD17O75943 681 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 RBM5P52756 815 aaKnown RBP eCLIP24.12■■□□□ 1.45
TRIM4-202ENST00000354241 RAB11FIP4Q86YS3 637 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 UBAC1Q9BSL1 405 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 SENP2Q9HC62 589 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 ORC4O43929 436 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 PICALMQ13492 652 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 ZDHHC15Q96MV8 337 aa24.12■■□□□ 1.45
TRIM4-202ENST00000354241 JAK2O60674 1132 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms